Gm16459 Pseudogene Detail

Summary

• Symbol
  Gm16459
• Name
  predicted gene 16459

• Feature Type
  pseudogene
• IDs
  MGI:3644110
  NCBI Gene: 671250
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:161627866-161628519 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 75.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644110	pseudogene	ChrX:161627834-161628519 (+)
129S1/SvImJ	ENSMUSG00200027275	pseudogene	ChrX:138355212-138355897 (+)
A/J	ENSMUSG00195038367	pseudogene	ChrX:143475552-143476237 (+)
AKR/J	ENSMUSG00220031795	pseudogene	ChrX:135331048-135331733 (+)
BALB/cJ	ENSMUSG00180040883	pseudogene	ChrX:138847361-138848046 (+)
C3H/HeJ	ENSMUSG00175027183	pseudogene	ChrX:143411257-143411942 (+)
C57BL/6NJ	ENSMUSG00215026984	pseudogene	ChrX:139245649-139246334 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013039	pseudogene	ChrX:151166389-151167953 (+)
CAST/EiJ	ENSTCUG00005033598	pseudogene	ChrX:140978606-140979505 (+)
CBA/J	ENSMUSG00210039620	pseudogene	ChrX:140753513-140754198 (+)
DBA/2J	ENSMUSG00185031330	pseudogene	ChrX:155682158-155682843 (+)
FVB/NJ	ENSMUSG00205031327	pseudogene	ChrX:139339206-139339891 (+)
JF1/MsJ	ENSUMUG00000037081	pseudogene	ChrX:176077109-176077794 (+)
LP/J	ENSMUSG00230026791	pseudogene	ChrX:162471491-162472176 (+)
NOD/ShiLtJ	ENSMUSG00190036065	pseudogene	ChrX:139858357-139859042 (+)
NZO/HlLtJ	ENSMUSG00225039166	pseudogene	ChrX:165860742-165861427 (+)
PWK/PhJ	ENSLUMG00010042776	pseudogene	ChrX:137151166-137151851 (+)
SPRET/EiJ	ENSMSPG00010020046	pseudogene	ChrX:142283110-142283664 (+)
WSB/EiJ	ENSIUOG00005026457	pseudogene	ChrX:140161946-140162631 (+)

Homology

• Gene Tree
  Gm16459
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  3
• Gene trapped
  3
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000084022 (Evidence)
• NCBI Gene
  671250

Representative Sequences			Length	Strain/Species
genomic	671250	NCBI Gene Model | MGI Sequence Detail	654	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14