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Rpl36-ps4 Pseudogene Detail
Summary
  • Symbol
    Rpl36-ps4
  • Name
    ribosomal protein L36, pseudogene 4
  • Synonyms
    Gm6716
  • Feature Type
    pseudogene
  • IDs
    MGI:3644086
    NCBI Gene: 626888
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr17:88228521-88228819 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 17, 57.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    14 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644086
pseudogene Chr17:88228488-88228853 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0024066
protein coding gene Chr17:88424913-88425329 (+)
AKR/J MGP_AKRJ_G0024035
protein coding gene Chr17:89898249-89898665 (+)
BALB/cJ MGP_BALBcJ_G0024067
protein coding gene Chr17:88254929-88255345 (+)
C3H/HeJ MGP_C3HHeJ_G0023832
protein coding gene Chr17:90798383-90798799 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024512
protein coding gene Chr17:94524761-94525177 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0023934
protein coding gene Chr17:86819820-86820236 (+)
FVB/NJ MGP_FVBNJ_G0023900
protein coding gene Chr17:86341334-86341750 (+)
LP/J MGP_LPJ_G0024018
protein coding gene Chr17:92154872-92155288 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023928
protein coding gene Chr17:98357882-98358298 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024557
protein coding gene Chr17:90440752-90441168 (+)
PWK/PhJ MGP_PWKPhJ_G0023056
protein coding gene Chr17:86494667-86495083 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022867
protein coding gene Chr17:87181304-87181786 (+)
WSB/EiJ MGP_WSBEiJ_G0023377
protein coding gene Chr17:91256677-91257093 (+)



Homology
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Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093922 Ensembl Gene Model | MGI Sequence Detail 299 C57BL/6J ±  kb
transcript ENSMUST00000179601 Ensembl | MGI Sequence Detail 299 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
    Gene Ontology 1
  • Earliest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory