Frg2f4 Gene Detail

Summary

• Symbol
  Frg2f4
• Name
  FSHD region gene 2 family member 4
• Synonyms
  Gm6219

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3644083
  NCBI Gene: 621364
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:106330668-106330916 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 56.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  101

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644083	protein coding gene	Chr14:106330368-106331629 (-)
129S1/SvImJ	ENSMUSG00200018142	pseudogene	Chr14:94927085-94927333 (-)
129S1/SvImJ	ENSMUSG00200018176	pseudogene	Chr14:100072244-100072487 (+)
129S1/SvImJ	ENSMUSG00200018167	pseudogene	Chr14:95273650-95273898 (+)
129S1/SvImJ	ENSMUSG00200018174	pseudogene	Chr14:95287111-95287359 (+)
129S1/SvImJ	ENSMUSG00200018168	pseudogene	Chr14:95277013-95277261 (+)
129S1/SvImJ	ENSMUSG00200018171	pseudogene	Chr14:95283745-95283993 (+)
129S1/SvImJ	ENSMUSG00200018175	pseudogene	Chr14:95290477-95290725 (+)
129S1/SvImJ	ENSMUSG00200018169	pseudogene	Chr14:95280379-95280627 (+)
A/J	ENSMUSG00195004314	pseudogene	Chr14:95027303-95027551 (-)
A/J	ENSMUSG00195004467	pseudogene	Chr14:95374687-95374935 (+)
A/J	ENSMUSG00195004483	pseudogene	Chr14:95384742-95384990 (+)
A/J	ENSMUSG00195004463	pseudogene	Chr14:95366886-95367134 (+)
A/J	ENSMUSG00195004471	pseudogene	Chr14:95381388-95381636 (+)
AKR/J	ENSMUSG00220001287	pseudogene	Chr14:94808714-94808962 (+)
AKR/J	ENSMUSG00220001210	pseudogene	Chr14:94454651-94454899 (-)
AKR/J	ENSMUSG00220001282	pseudogene	Chr14:94794214-94794462 (+)
AKR/J	ENSMUSG00220001289	pseudogene	Chr14:94812068-94812316 (+)
AKR/J	ENSMUSG00220001284	pseudogene	Chr14:94802014-94802262 (+)
BALB/cJ	ENSMUSG00180010812	pseudogene	Chr14:94850417-94850665 (+)
BALB/cJ	ENSMUSG00180010821	pseudogene	Chr14:94868273-94868521 (+)
BALB/cJ	ENSMUSG00180010817	pseudogene	Chr14:94864919-94865167 (+)
BALB/cJ	ENSMUSG00180010814	pseudogene	Chr14:94858218-94858466 (+)
BALB/cJ	ENSMUSG00180010464	pseudogene	Chr14:94510827-94511075 (-)
C3H/HeJ	ENSMUSG00175014220	pseudogene	Chr14:96402081-96402329 (-)
C3H/HeJ	ENSMUSG00175014555	pseudogene	Chr14:96749449-96749697 (+)
C3H/HeJ	ENSMUSG00175014567	pseudogene	Chr14:96759504-96759752 (+)
C3H/HeJ	ENSMUSG00175014563	pseudogene	Chr14:96756150-96756398 (+)
C3H/HeJ	ENSMUSG00175014550	pseudogene	Chr14:96741648-96741896 (+)
C57BL/6NJ	ENSMUSG00215007825	pseudogene	Chr14:94960069-94960317 (+)
C57BL/6NJ	ENSMUSG00215007784	pseudogene	Chr14:94938849-94939097 (+)
C57BL/6NJ	ENSMUSG00215007628	pseudogene	Chr14:94584709-94584957 (-)
C57BL/6NJ	ENSMUSG00215007836	pseudogene	Chr14:94963436-94963684 (+)
C57BL/6NJ	ENSMUSG00215007810	pseudogene	Chr14:94956704-94956952 (+)
C57BL/6NJ	ENSMUSG00215007802	pseudogene	Chr14:94950018-94950261 (+)
C57BL/6NJ	ENSMUSG00215007792	pseudogene	Chr14:94942211-94942459 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002922	pseudogene	Chr14:95943779-95944027 (-)
CAST/EiJ	ENSTCUG00005003005	pseudogene	Chr14:96285915-96286163 (+)
CAST/EiJ	ENSTCUG00005003006	pseudogene	Chr14:96289276-96289524 (+)
CAST/EiJ	ENSTCUG00005003008	pseudogene	Chr14:96292637-96292885 (+)
CAST/EiJ	ENSTCUG00005003003	pseudogene	Chr14:101110581-101110829 (+)
CAST/EiJ	ENSTCUG00005003009	pseudogene	Chr14:96295992-96296240 (+)
CBA/J	ENSMUSG00210014368	pseudogene	Chr14:95430752-95431000 (+)
CBA/J	ENSMUSG00210014047	pseudogene	Chr14:95091187-95091435 (-)
CBA/J	ENSMUSG00210014386	pseudogene	Chr14:95448608-95448856 (+)
CBA/J	ENSMUSG00210014380	pseudogene	Chr14:95445254-95445502 (+)
CBA/J	ENSMUSG00210014375	pseudogene	Chr14:95438553-95438801 (+)
DBA/2J	ENSMUSG00185011556	pseudogene	Chr14:100595924-100596172 (+)
DBA/2J	ENSMUSG00185011560	pseudogene	Chr14:100602625-100602873 (+)
DBA/2J	ENSMUSG00185021683	pseudogene	Chr14:105395944-105396187 (+)
DBA/2J	ENSMUSG00185011547	pseudogene	Chr14:100588121-100588369 (+)
DBA/2J	ENSMUSG00185011562	pseudogene	Chr14:100605979-100606227 (+)
DBA/2J	ENSMUSG00185011080	pseudogene	Chr14:100247906-100248154 (-)
FVB/NJ	ENSMUSG00205008306	pseudogene	Chr14:94187460-94187708 (-)
FVB/NJ	ENSMUSG00205009041	pseudogene	Chr14:94535874-94539469 (+)
FVB/NJ	ENSMUSG00205009018	pseudogene	Chr14:94521365-94521613 (+)
FVB/NJ	ENSMUSG00205009048	pseudogene	Chr14:94545950-94546198 (+)
FVB/NJ	ENSMUSG00205009031	pseudogene	Chr14:94532534-94532777 (+)
FVB/NJ	ENSMUSG00205009053	pseudogene	Chr14:94549315-94549563 (+)
FVB/NJ	ENSMUSG00205009024	pseudogene	Chr14:94524726-94524974 (+)
JF1/MsJ	ENSUMUG00000013158	pseudogene	Chr14:111600249-111600497 (+)
JF1/MsJ	ENSUMUG00000013193	pseudogene	Chr14:111610301-111610549 (+)
JF1/MsJ	ENSUMUG00000012598	pseudogene	Chr14:111244409-111244657 (-)
JF1/MsJ	ENSUMUG00000013174	pseudogene	Chr14:111606945-111607193 (+)
LP/J	ENSMUSG00230004209	pseudogene	Chr14:112470287-112470535 (+)
LP/J	ENSMUSG00230004221	pseudogene	Chr14:112480339-112480587 (+)
LP/J	ENSMUSG00230004078	pseudogene	Chr14:112114669-112114917 (-)
LP/J	ENSMUSG00230004214	pseudogene	Chr14:112476983-112477231 (+)
NOD/ShiLtJ	ENSMUSG00190002306	pseudogene	Chr14:95260904-95261152 (+)
NOD/ShiLtJ	ENSMUSG00190002318	pseudogene	Chr14:100086130-100086373 (+)
NOD/ShiLtJ	ENSMUSG00190002270	pseudogene	Chr14:95229604-95229852 (+)
NOD/ShiLtJ	ENSMUSG00190002292	pseudogene	Chr14:95244113-95247708 (+)
NOD/ShiLtJ	ENSMUSG00190002283	pseudogene	Chr14:95240773-95241016 (+)
NOD/ShiLtJ	ENSMUSG00190002067	pseudogene	Chr14:94880085-94880333 (-)
NOD/ShiLtJ	ENSMUSG00190002303	pseudogene	Chr14:95257538-95257786 (+)
NOD/ShiLtJ	ENSMUSG00190002300	pseudogene	Chr14:95254184-95254432 (+)
NOD/ShiLtJ	ENSMUSG00190002277	pseudogene	Chr14:95232966-95233214 (+)
NZO/HlLtJ	ENSMUSG00225021504	pseudogene	Chr14:102517182-102517430 (-)
NZO/HlLtJ	ENSMUSG00225022070	pseudogene	Chr14:102885807-102889402 (+)
NZO/HlLtJ	ENSMUSG00225022078	pseudogene	Chr14:102895878-102896126 (+)
NZO/HlLtJ	ENSMUSG00225022056	pseudogene	Chr14:102882467-102882710 (+)
NZO/HlLtJ	ENSMUSG00225022087	pseudogene	Chr14:102899240-102899488 (+)
NZO/HlLtJ	ENSMUSG00225022047	pseudogene	Chr14:102874660-102874908 (+)
NZO/HlLtJ	ENSMUSG00225022097	pseudogene	Chr14:102902594-102902842 (+)
NZO/HlLtJ	ENSMUSG00225022039	pseudogene	Chr14:102871298-102871546 (+)
NZO/HlLtJ	ENSMUSG00225022108	pseudogene	Chr14:102905960-102906208 (+)
PWK/PhJ	ENSLUMG00010001364	pseudogene	Chr14:94481489-94481737 (+)
PWK/PhJ	ENSLUMG00010001167	pseudogene	Chr14:94134164-94134412 (-)
PWK/PhJ	ENSLUMG00010001362	pseudogene	Chr14:94473689-94473937 (+)
PWK/PhJ	ENSLUMG00010001367	pseudogene	Chr14:94488190-94488438 (+)
PWK/PhJ	ENSLUMG00010001371	pseudogene	Chr14:94491544-94491792 (+)
SPRET/EiJ	ENSMSPG00010009915	pseudogene	Chr14:98129352-98129600 (-)
SPRET/EiJ	ENSMSPG00010010390	pseudogene	Chr14:98501928-98502176 (+)
SPRET/EiJ	ENSMSPG00010010395	pseudogene	Chr14:98505265-98505513 (+)
WSB/EiJ	ENSIUOG00005006778	pseudogene	Chr14:94415975-94416223 (+)
WSB/EiJ	ENSIUOG00005006792	pseudogene	Chr14:94427130-94427378 (+)
WSB/EiJ	ENSIUOG00005006767	pseudogene	Chr14:94409251-94409499 (+)
WSB/EiJ	ENSIUOG00005006774	pseudogene	Chr14:94412613-94412861 (+)
WSB/EiJ	ENSIUOG00005006692	pseudogene	Chr14:94068575-94068823 (-)
WSB/EiJ	ENSIUOG00005006798	pseudogene	Chr14:94430496-94430744 (+)
WSB/EiJ	ENSIUOG00005006786	pseudogene	Chr14:94423777-94424025 (+)

Homology

• Gene Tree
  Frg2f4
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Frg2f4
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  105
• RefSeq
  1

• Ensembl
  ENSMUSG00000115800 (Evidence)
• NCBI Gene
  621364

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115800	Ensembl Gene Model | MGI Sequence Detail	249	C57BL/6J
transcript	ENSMUST00000226185	Ensembl | MGI Sequence Detail	249	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:67314 Roix J, et al., Molecular and functional mapping of the piebald deletion complex on mouse chromosome 14. Genetics. 2001 Feb;157(2):803-15