Gm6548 Pseudogene Detail

Summary

• Symbol
  Gm6548
• Name
  predicted gene 6548

• Feature Type
  pseudogene
• IDs
  MGI:3644071
  NCBI Gene: 625054
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:79158221-79159385 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 49.56 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644071	pseudogene	Chr17:79157933-79159973 (-)
129S1/SvImJ	ENSMUSG00200024998	pseudogene	Chr17:74529023-74530187 (-)
A/J	ENSMUSG00195028279	pseudogene	Chr17:75883358-75884522 (-)
AKR/J	ENSMUSG00220013886	pseudogene	Chr17:74790969-74792133 (-)
BALB/cJ	ENSMUSG00180005206	pseudogene	Chr17:75593126-75594290 (-)
C3H/HeJ	ENSMUSG00175016652	pseudogene	Chr17:74871607-74872771 (-)
C57BL/6NJ	ENSMUSG00215017983	pseudogene	Chr17:74583403-74584567 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015435	pseudogene	Chr17:75441289-75442456 (-)
CBA/J	ENSMUSG00210020749	pseudogene	Chr17:74735002-74736166 (-)
DBA/2J	ENSMUSG00185013108	pseudogene	Chr17:77568476-77569640 (-)
FVB/NJ	ENSMUSG00205032582	pseudogene	Chr17:75349384-75350548 (-)
JF1/MsJ	ENSUMUG00000022507	pseudogene	Chr17:77263929-77265093 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190010251	pseudogene	Chr17:74633384-74634548 (-)
NZO/HlLtJ	ENSMUSG00225029177	pseudogene	Chr17:80825962-80827126 (-)
PWK/PhJ	ENSLUMG00010005858	pseudogene	Chr17:74508518-74509682 (-)
SPRET/EiJ	ENSMSPG00010008833	pseudogene	Chr17:74978559-74979482 (-)
WSB/EiJ	ENSIUOG00005010662	pseudogene	Chr17:75564094-75565258 (-)

Homology

• Gene Tree
  Gm6548
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000091549 (Evidence)
• NCBI Gene
  625054

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091549	Ensembl Gene Model | MGI Sequence Detail	1165	C57BL/6J
transcript	ENSMUST00000167498	Ensembl | MGI Sequence Detail	1165	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm6548:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr149414	Chr17:79160628-79160642 (-)	-1,250 bp