Gm8238 Pseudogene Detail

Summary

• Symbol
  Gm8238
• Name
  predicted gene 8238

• Feature Type
  pseudogene
• IDs
  MGI:3644041
  NCBI Gene: 666686
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:13418508-13418942 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 6.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644041	pseudogene	Chr15:13418428-13419024 (-)
129S1/SvImJ	ENSMUSG00200004302	pseudogene	Chr15:10404763-10405197 (-)
A/J	ENSMUSG00195011721	pseudogene	Chr15:10309843-10310277 (-)
AKR/J	ENSMUSG00220023009	pseudogene	Chr15:10237779-10238213 (-)
BALB/cJ	ENSMUSG00180009675	pseudogene	Chr15:10335155-10335589 (-)
C3H/HeJ	ENSMUSG00175001973	pseudogene	Chr15:10492275-10492709 (-)
C57BL/6NJ	ENSMUSG00215008034	pseudogene	Chr15:10351502-10351936 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002606	pseudogene	Chr15:10447233-10447667 (-)
CBA/J	ENSMUSG00210004745	pseudogene	Chr15:10477287-10477721 (-)
DBA/2J	ENSMUSG00185003420	pseudogene	Chr15:10434389-10434823 (-)
FVB/NJ	ENSMUSG00205010560	pseudogene	Chr15:10290820-10291254 (-)
JF1/MsJ	ENSUMUG00000013718	pseudogene	Chr15:10528053-10528487 (-)
LP/J	ENSMUSG00230015989	pseudogene	Chr15:13897074-13897508 (-)
NOD/ShiLtJ	ENSMUSG00190002144	pseudogene	Chr15:10375663-10376097 (-)
NZO/HlLtJ	ENSMUSG00225024206	pseudogene	Chr15:14129152-14129586 (-)
PWK/PhJ	ENSLUMG00010015116	pseudogene	Chr15:10591160-10591594 (-)
SPRET/EiJ	ENSMSPG00010001011	pseudogene	Chr15:10637491-10637925 (-)
WSB/EiJ	ENSIUOG00005012088	pseudogene	Chr15:10405263-10405697 (-)

Homology

• Gene Tree
  Gm8238
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115347 (Evidence)
• NCBI Gene
  666686

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115347	Ensembl Gene Model | MGI Sequence Detail	435	C57BL/6J
transcript	ENSMUST00000227992	Ensembl | MGI Sequence Detail	435	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;