Gm7780 Pseudogene Detail

Summary

• Symbol
  Gm7780
• Name
  predicted gene 7780

• Feature Type
  pseudogene
• IDs
  MGI:3644021
  NCBI Gene: 665772
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:114476698-114477103 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 64.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644021	pseudogene	Chr9:114476658-114480230 (-)
129S1/SvImJ	ENSMUSG00200031721	pseudogene	Chr9:111579238-111579643 (-)
A/J	ENSMUSG00195045448	pseudogene	Chr9:110777720-110778129 (-)
AKR/J	ENSMUSG00220019642	pseudogene	Chr9:111241459-111241864 (-)
BALB/cJ	ENSMUSG00180035465	pseudogene	Chr9:111315438-111315847 (-)
C3H/HeJ	ENSMUSG00175020204	pseudogene	Chr9:111536469-111536878 (-)
C57BL/6NJ	ENSMUSG00215034465	pseudogene	Chr9:111421677-111422082 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034293	pseudogene	Chr9:111194628-111195032 (-)
CBA/J	ENSMUSG00210040674	pseudogene	Chr9:111264073-111264478 (-)
DBA/2J	ENSMUSG00185017002	pseudogene	Chr9:111600839-111601244 (-)
FVB/NJ	ENSMUSG00205029049	pseudogene	Chr9:111438141-111438550 (-)
JF1/MsJ	ENSUMUG00000047676	pseudogene	Chr9:111424469-111424874 (-)
LP/J	ENSMUSG00230050391	pseudogene	Chr9:111707991-111708396 (-)
NOD/ShiLtJ	ENSMUSG00190051037	pseudogene	Chr9:111193968-111194373 (-)
NZO/HlLtJ	ENSMUSG00225024134	pseudogene	Chr9:111989526-111989931 (-)
PWK/PhJ	ENSLUMG00010039195	pseudogene	Chr9:111375673-111376080 (-)
SPRET/EiJ	ENSMSPG00010025933	pseudogene	Chr9:113034847-113035250 (-)
WSB/EiJ	ENSIUOG00005048336	pseudogene	Chr9:110654333-110654742 (-)

Homology

• Gene Tree
  Gm7780
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000111744 (Evidence)
• NCBI Gene
  665772

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111744	Ensembl Gene Model | MGI Sequence Detail	406	C57BL/6J
transcript	ENSMUST00000214787	Ensembl | MGI Sequence Detail	406	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14