Rpl7a-ps11 Pseudogene Detail

Summary

• Symbol
  Rpl7a-ps11
• Name
  ribosomal protein L7A, pseudogene 11
• Synonyms
  Gm7322

• Feature Type
  pseudogene
• IDs
  MGI:3644020
  NCBI Gene: 641660
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:165637207-165638007 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 78.17 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644020	pseudogene	ChrX:165637186-165638049 (+)
129S1/SvImJ	ENSMUSG00200027524	pseudogene	ChrX:142376273-142377073 (+)
A/J	ENSMUSG00195050747	pseudogene	Chr5:28281325-28282125 (+)
A/J	ENSMUSG00195016747	pseudogene	ChrX:147498204-147499004 (+)
AKR/J	ENSMUSG00220032051	pseudogene	ChrX:139380464-139381264 (+)
BALB/cJ	ENSMUSG00180041825	pseudogene	ChrX:142884747-142885547 (+)
C3H/HeJ	ENSMUSG00175010616	pseudogene	ChrX:147431437-147432237 (+)
C57BL/6NJ	ENSMUSG00215017555	pseudogene	ChrX:143257255-143258055 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210030134	pseudogene	ChrX:144845069-144845869 (+)
DBA/2J	ENSMUSG00185031190	pseudogene	ChrX:159699028-159699828 (+)
FVB/NJ	ENSMUSG00205002808	pseudogene	ChrX:143355179-143355979 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230027214	pseudogene	ChrX:166491026-166491826 (+)
LP/J	ENSMUSG00230013370	pseudogene	Chr15:36710181-36710980 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225038823	pseudogene	ChrX:169879957-169880757 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005011087	pseudogene	ChrX:144315020-144315820 (+)

Homology

• Gene Tree
  Rpl7a-ps11
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000067147 (Evidence)
• NCBI Gene
  641660

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000067147	Ensembl Gene Model | MGI Sequence Detail	801	C57BL/6J
transcript	ENSMUST00000118791	Ensembl | MGI Sequence Detail	801	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;