Gm5447 Gene Detail

Summary

• Symbol
  Gm5447
• Name
  predicted gene 5447

• Feature Type
  protein coding gene
• IDs
  MGI:3644017
  NCBI Gene: 432743
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:31158147-31160231 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 13.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644017	protein coding gene	Chr13:31158147-31160231 (+)
129S1/SvImJ	ENSMUSG00200032734	unclassified gene	Chr13:28315237-28317321 (+)
A/J	ENSMUSG00195038684	unclassified gene	Chr13:27467508-27469592 (+)
AKR/J	ENSMUSG00220012982	unclassified gene	Chr13:27322568-27324652 (+)
BALB/cJ	ENSMUSG00180023074	unclassified gene	Chr13:27767646-27769730 (+)
C3H/HeJ	ENSMUSG00175033524	unclassified gene	Chr13:27790041-27792125 (+)
C57BL/6NJ	ENSMUSG00215014848	unclassified gene	Chr13:27933629-27935713 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0018396	protein coding gene	Chr13:26515215-26516977 (+)
CAST/EiJ	ENSTCUG00005011356	unclassified gene	Chr13:27925270-27927354 (+)
CBA/J	ENSMUSG00210027015	unclassified gene	Chr13:27733709-27735793 (+)
DBA/2J	ENSMUSG00185021518	unclassified gene	Chr13:28552729-28554813 (+)
FVB/NJ	ENSMUSG00205031001	unclassified gene	Chr13:27558097-27560181 (+)
JF1/MsJ	ENSUMUG00000016312	unclassified gene	Chr13:28181747-28183778 (+)
LP/J	ENSMUSG00230020895	unclassified gene	Chr13:37877388-37879472 (+)
NOD/ShiLtJ	ENSMUSG00190040294	unclassified gene	Chr13:27927507-27929591 (+)
NZO/HlLtJ	ENSMUSG00225035483	unclassified gene	Chr13:31666841-31668925 (+)
PWK/PhJ	ENSLUMG00010030265	unclassified gene	Chr13:26995835-26997916 (+)
SPRET/EiJ	ENSMSPG00010025053	unclassified gene	Chr13:27053052-27055099 (+)
WSB/EiJ	ENSIUOG00005016529	unclassified gene	Chr13:27136132-27138216 (+)

Homology

• Gene Tree
  Gm5447
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotypes from 1 allele in 1 genetic background
  12 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Endonuclease-mediated
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm5447
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000056257 (Evidence)
• NCBI Gene
  432743

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000056257	Ensembl Gene Model | MGI Sequence Detail	2085	C57BL/6J
transcript	AK077314	GenBank | ENA | DDBJ | MGI Sequence Detail	2086	C57BL/6J
polypeptide	Q8BPB2	UniProt | EBI | MGI Sequence Detail	115	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 5

  cDNA 5

  
  

  Microarray probesets 1

References

• Summaries
  All 22

  Phenotypes 12
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136