Gm9009 Pseudogene Detail

Summary

• Symbol
  Gm9009
• Name
  predicted pseudogene 9009

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3643998
  NCBI Gene: 108168448
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:93659406-93659690 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 41.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643998	pseudogene	ChrX:93659406-93659731 (+)
129S1/SvImJ	ENSMUSG00200038330	pseudogene	ChrX:75432515-75432840 (+)
A/J	ENSMUSG00195032040	pseudogene	ChrX:79218005-79218330 (+)
AKR/J	ENSMUSG00220030450	pseudogene	ChrX:73949408-73949733 (+)
BALB/cJ	ENSMUSG00180022243	pseudogene	ChrX:75856839-75857164 (+)
C3H/HeJ	ENSMUSG00175019344	pseudogene	ChrX:79580074-79580399 (+)
C57BL/6NJ	ENSMUSG00215022850	pseudogene	ChrX:76114110-76114435 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012770	pseudogene	ChrX:89263207-89263538 (+)
CAST/EiJ	ENSTCUG00005028679	pseudogene	ChrX:77114321-77114646 (+)
CBA/J	ENSMUSG00210035726	pseudogene	ChrX:76290105-76290430 (+)
DBA/2J	ENSMUSG00185033094	pseudogene	ChrX:88579757-88580082 (+)
FVB/NJ	ENSMUSG00205025593	pseudogene	ChrX:75561611-75561936 (+)
JF1/MsJ	ENSUMUG00000021848	pseudogene	ChrX:109415871-109416199 (+)
LP/J	ENSMUSG00230014538	pseudogene	ChrX:95277889-95278214 (+)
NOD/ShiLtJ	ENSMUSG00190018670	pseudogene	ChrX:75477165-75477490 (+)
NZO/HlLtJ	ENSMUSG00225045852	pseudogene	ChrX:100410786-100411111 (+)
PWK/PhJ	ENSLUMG00010039149	pseudogene	ChrX:74756538-74756866 (+)
SPRET/EiJ	ENSMSPG00010032449	pseudogene	ChrX:78829974-78830299 (+)
WSB/EiJ	ENSIUOG00005041441	pseudogene	ChrX:76136120-76136445 (+)

Homology

• Gene Tree
  Gm9009
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  3

• Ensembl
  ENSMUSG00000080974 (Evidence)
• NCBI Gene
  108168448

Representative Sequences			Length	Strain/Species
genomic	108168448	NCBI Gene Model | MGI Sequence Detail	285	C57BL/6J
transcript	XM_036162164	RefSeq | MGI Sequence Detail	285	C57BL/6J
polypeptide	XP_036018057	RefSeq | MGI Sequence Detail	89	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;