Mageb6b1 Gene Detail

Summary

• Symbol
  Mageb6b1
• Name
  MAGE family member B6B1
• Synonyms
  Gm5072

• Feature Type
  protein coding gene
• IDs
  MGI:3643982
  NCBI Gene: 278167
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:90436106-90437140 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 40.37 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  6

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643982	protein coding gene	ChrX:90436106-90437140 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0035868	protein coding gene	ChrX:87089897-87090931 (-)
C3H/HeJ	MGP_C3HHeJ_G0035575	protein coding gene	ChrX:88097089-88098123 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0035553	protein coding gene	ChrX:93558176-93559210 (-)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0036422	protein coding gene	ChrX:87362005-87363039 (+)
PWK/PhJ	MGP_PWKPhJ_G0034561	protein coding gene	ChrX:70720509-70723236 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Human Ortholog
  MAGEB6, MAGE family member B6

• Vertebrate Orthologs
  3

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MAGEB6, MAGE family member B6
  
• Synonyms
  CT3.4, MAGE-B6, MAGEB6A
• Links
  HGNC:23796

  NCBI Gene ID: 158809

  UniProt: Q8N7X4

  
  
• Chr Location
  Xp21.3; chrX:26192440-26195646 (+)  GRCh38

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• Human Ortholog
  MAGEB6B, MAGE family member B6B
  
• Synonyms
  MAGEB6P1
• Links
  HGNC:28824

  NCBI Gene ID: 392433

  UniProt: A0A0J9YX57

  
  
• Chr Location
  Xp21.3; chrX:26160601-26162410 (+)  GRCh38

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• MGI Vertebrate Homology
  Mageb6b1 stringent orthology
  2 human;1 mouse;1 rat
  
• HCOP
  vertebrate homology predictions: MAGEB6, MAGEB6B
• Gene Tree
  Mageb6b1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS53131.1

• Ensembl
  ENSMUSG00000094861 (Evidence)
• NCBI Gene
  278167

Representative Sequences			Length	Strain/Species
genomic	278167	NCBI Gene Model | MGI Sequence Detail	1035	C57BL/6J
transcript	NM_001114678	RefSeq | MGI Sequence Detail	1035	C57BL/6
polypeptide	NP_001108150	RefSeq | MGI Sequence Detail	344	C57BL/6

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR002190 MAGE homology domain
  IPR041898 MAGE homology domain, winged helix WH1 motif
  IPR041899 MAGE homology domain, winged helix WH2 motif
  IPR037445 Melanoma-associated antigen
  IPR021072 Melanoma associated antigen, N-terminal

Molecular
Reagents

• 
  

  Microarray probesets 3

Other
Accession IDs

MGI:6448359

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:155721 Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI), Consensus CDS project. Database Download. 2010;