Gm6180 Pseudogene Detail

Summary

• Symbol
  Gm6180
• Name
  predicted pseudogene 6180

• Feature Type
  pseudogene
• IDs
  MGI:3643972
  NCBI Gene: 620772
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr8:42699948-42700445 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 23.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643972	pseudogene	Chr8:42699873-42700832 (+)
129S1/SvImJ	ENSMUSG00200053479	pseudogene	Chr19:2302556-2302560 (+)
A/J	ENSMUSG00195054157	pseudogene	Chr19:2696880-2696884 (+)
AKR/J	ENSMUSG00220052085	pseudogene	Chr19:2470003-2470007 (+)
BALB/cJ	ENSMUSG00180052311	pseudogene	Chr19:3071602-3071606 (+)
C3H/HeJ	ENSMUSG00175015077	pseudogene	Chr8:37965902-37966399 (+)
C57BL/6NJ	ENSMUSG00215010105	pseudogene	Chr8:37767392-37767889 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010662	pseudogene	Chr2:140216454-140216945 (-)
CAST/EiJ	ENSTCUG00005025311	pseudogene	Chr3:19142377-19142874 (+)
CAST/EiJ	ENSTCUG00005005700	pseudogene	Chr8:37880394-37880804 (+)
CBA/J	ENSMUSG00210050730	pseudogene	Chr19:2324129-2324133 (+)
DBA/2J	ENSMUSG00185006126	pseudogene	Chr8:43706687-43707184 (+)
DBA/2J	ENSMUSG00185019356	pseudogene	Chr6:111253135-111253632 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000016027	pseudogene	Chr8:45433863-45434360 (+)
LP/J	ENSMUSG00230054393	pseudogene	Chr19:3609465-3609468 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010013542	pseudogene	Chr8:37653701-37654198 (+)
SPRET/EiJ	ENSMSPG00010051703	pseudogene	Chr19:2437270-2437274 (+)
WSB/EiJ	ENSIUOG00005051737	pseudogene	Chr19:2339554-2339558 (+)

Homology

• Gene Tree
  Gm6180
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000053038 (Evidence)
• NCBI Gene
  620772

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000053038	Ensembl Gene Model | MGI Sequence Detail	498	C57BL/6J
transcript	ENSMUST00000065243	Ensembl | MGI Sequence Detail	498	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm6180:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr77101	Chr8:42699871-42699874 (+)	-75 bp
Tssr77102	Chr8:42700226-42700251 (+)	291 bp