Gm6702 Pseudogene Detail

Summary

• Symbol
  Gm6702
• Name
  predicted gene 6702

• Feature Type
  pseudogene
• IDs
  MGI:3643910
  NCBI Gene: 606539
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:107618223-107618693 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 57.21 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643910	pseudogene	Chr7:107618189-107618913 (+)
129S1/SvImJ	ENSMUSG00200034809	pseudogene	Chr7:94141011-94141481 (+)
A/J	ENSMUSG00195054750	pseudogene	Chr7:98656081-98656551 (+)
AKR/J	ENSMUSG00220040236	pseudogene	Chr7:92054733-92055203 (+)
BALB/cJ	ENSMUSG00180046506	pseudogene	Chr7:95330645-95331115 (+)
C3H/HeJ	ENSMUSG00175052063	pseudogene	Chr7:95966700-95967170 (+)
C57BL/6NJ	ENSMUSG00215051175	pseudogene	Chr7:95262394-95262864 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053244	pseudogene	Chr7:98623675-98624145 (+)
CBA/J	ENSMUSG00210048270	pseudogene	Chr7:95792283-95792753 (+)
DBA/2J	ENSMUSG00185056991	pseudogene	Chr7:100144058-100144528 (+)
FVB/NJ	ENSMUSG00205048935	pseudogene	Chr7:95724048-95724518 (+)
JF1/MsJ	ENSUMUG00000051430	pseudogene	Chr7:105137276-105137746 (+)
LP/J	ENSMUSG00230048543	pseudogene	Chr7:106245631-106246101 (+)
NOD/ShiLtJ	ENSMUSG00190048896	pseudogene	Chr7:95943938-95944408 (+)
NZO/HlLtJ	ENSMUSG00225018584	pseudogene	Chr7:104468108-104468578 (+)
PWK/PhJ	ENSLUMG00010041893	pseudogene	Chr7:94307808-94308278 (+)
SPRET/EiJ	ENSMSPG00010042787	pseudogene	Chr7:95376801-95377271 (+)
WSB/EiJ	ENSIUOG00005050393	pseudogene	Chr7:96601987-96602457 (+)

Homology

• Gene Tree
  Gm6702
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6702
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108844 (Evidence)
• NCBI Gene
  606539

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108844	Ensembl Gene Model | MGI Sequence Detail	471	C57BL/6J
transcript	ENSMUST00000208496	Ensembl | MGI Sequence Detail	471	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55