Gm5204 Pseudogene Detail

Summary

• Symbol
  Gm5204
• Name
  predicted gene 5204

• Feature Type
  pseudogene
• IDs
  MGI:3643898
  NCBI Gene: 382872
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:37633805-37634655 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 22.18 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  192 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643898	pseudogene	Chr14:37514169-37634655 (-)
129S1/SvImJ	ENSMUSG00200038868	pseudogene	Chr14:29516992-29517842 (-)
A/J	ENSMUSG00195014427	pseudogene	Chr14:30540921-30541771 (-)
AKR/J	ENSMUSG00220036630	pseudogene	Chr14:29687735-29688585 (-)
BALB/cJ	ENSMUSG00180030295	pseudogene	Chr14:29625333-29626183 (-)
C3H/HeJ	ENSMUSG00175043720	pseudogene	Chr14:29696740-29697590 (-)
C57BL/6NJ	ENSMUSG00215036354	pseudogene	Chr14:29938230-29939080 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025704	pseudogene	Chr14:29712095-29712945 (-)
CBA/J	ENSMUSG00210045299	pseudogene	Chr14:29943234-29944084 (-)
DBA/2J	ENSMUSG00185015553	pseudogene	Chr14:34183913-34184763 (-)
FVB/NJ	ENSMUSG00205037703	pseudogene	Chr14:29805734-29806584 (-)
JF1/MsJ	ENSUMUG00000037806	pseudogene	Chr14:41509922-41510772 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190020118	pseudogene	Chr14:29978111-29978961 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010023451	pseudogene	Chr14:18057524-18058374 (-)
SPRET/EiJ	ENSMSPG00010003775	pseudogene	Chr14:31723224-31724081 (-)
WSB/EiJ	ENSIUOG00005013002	pseudogene	Chr14:29754621-29755471 (-)

Homology

• Gene Tree
  Gm5204
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000114227 (Evidence)
• NCBI Gene
  382872

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114227	Ensembl Gene Model | MGI Sequence Detail	851	C57BL/6J
transcript	ENSMUST00000223652	Ensembl | MGI Sequence Detail	851	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;