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Gm5550 Pseudogene Detail
Summary
  • Symbol
    Gm5550
  • Name
    predicted gene 5550
  • Feature Type
    pseudogene
  • IDs
    MGI:3643895
    NCBI Gene: 433686
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:157522357-157523432 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 81.49 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643895
 pseudogene Chr3:157522237-157523432 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0011861
 pseudogene Chr2:130136271-130137255 (+)
AKR/J MGP_AKRJ_G0011829
 pseudogene Chr2:133882582-133892665 (+)
BALB/cJ MGP_BALBcJ_G0014471
 pseudogene ChrX:66153760-66154823 (+)
C3H/HeJ MGP_C3HHeJ_G0011722
 pseudogene Chr2:134343305-134344294 (+)
C57BL/6NJ MGP_C57BL6NJ_G0012774
 pseudogene Chr3:167256442-167257410 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0011697
 pseudogene Chr2:145035771-145036758 (+)
DBA/2J MGP_DBA2J_G0011753
 pseudogene Chr2:129535270-129536252 (+)
FVB/NJ MGP_FVBNJ_G0011087
 pseudogene Chr15:73621410-73622417 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0012365
 pseudogene Chr3:181806167-181807200 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0012778
 pseudogene Chr3:159882891-159883966 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    14
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106419 Ensembl Gene Model | MGI Sequence Detail 1076 C57BL/6J ±  kb
transcript ENSMUST00000198658 Ensembl | MGI Sequence Detail 1076 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory