Gm6019 Pseudogene Detail

Summary

• Symbol
  Gm6019
• Name
  predicted gene 6019

• Feature Type
  pseudogene
• IDs
  MGI:3643890
  NCBI Gene: 547057
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:4312831-4313534 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 1.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643890	pseudogene	ChrX:4312831-4313588 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185030594	pseudogene	ChrX:3305868-3306821 (-)
DBA/2J	ENSMUSG00185029327	pseudogene	ChrX:3597913-3598648 (-)
DBA/2J	ENSMUSG00185031080	pseudogene	ChrX:6027006-6027959 (-)
DBA/2J	ENSMUSG00185030963	pseudogene	ChrX:5485203-5486156 (-)
DBA/2J	ENSMUSG00185030445	pseudogene	ChrX:2457729-2458682 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000017086	pseudogene	ChrX:9100163-9100898 (-)
JF1/MsJ	ENSUMUG00000017021	pseudogene	ChrX:6151737-6152472 (+)
JF1/MsJ	ENSUMUG00000019151	pseudogene	ChrX:14501152-14501887 (+)
JF1/MsJ	ENSUMUG00000016866	pseudogene	ChrX:1273240-1273975 (-)
LP/J	ENSMUSG00230007132	pseudogene	ChrX:8066636-8067371 (+)
LP/J	ENSMUSG00230009880	pseudogene	Chr13:3384469-3385422 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225046522	pseudogene	ChrX:15812952-15813905 (-)
NZO/HlLtJ	ENSMUSG00225038204	pseudogene	ChrX:6785793-6786528 (+)
NZO/HlLtJ	ENSMUSG00225046535	pseudogene	ChrX:15974813-15975548 (-)
NZO/HlLtJ	ENSMUSG00225038148	pseudogene	ChrX:4415807-4416542 (-)
NZO/HlLtJ	ENSMUSG00225045916	pseudogene	ChrX:13390333-13391068 (-)
NZO/HlLtJ	ENSMUSG00225038237	pseudogene	ChrX:7890600-7891335 (-)
NZO/HlLtJ	ENSMUSG00225038320	pseudogene	ChrX:9539261-9539996 (+)
NZO/HlLtJ	ENSMUSG00225046313	pseudogene	ChrX:11096635-11097370 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm6019
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000094794 (Evidence)
• NCBI Gene
  547057

Representative Sequences			Length	Strain/Species
genomic	547057	NCBI Gene Model | MGI Sequence Detail	704	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;