Gm5353 Pseudogene Detail

Summary

• Symbol
  Gm5353
• Name
  predicted gene 5353

• Feature Type
  pseudogene
• IDs
  MGI:3643866
  NCBI Gene: 634222
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:77588884-77589676 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 36.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643866	pseudogene	Chr8:77588838-77589688 (-)
129S1/SvImJ	ENSMUSG00200026553	pseudogene	Chr8:71945656-71946448 (-)
A/J	ENSMUSG00195018594	pseudogene	Chr8:72306555-72307347 (-)
AKR/J	ENSMUSG00220024153	pseudogene	Chr8:72410158-72410950 (-)
BALB/cJ	ENSMUSG00180022397	pseudogene	Chr8:72147649-72148441 (-)
C3H/HeJ	ENSMUSG00175012020	pseudogene	Chr8:72233704-72234496 (-)
C57BL/6NJ	ENSMUSG00215027025	pseudogene	Chr8:71863367-71864159 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012331	pseudogene	Chr8:68433531-68434323 (-)
CAST/EiJ	ENSTCUG00005038352	pseudogene	Chr8:71826747-71827539 (-)
CBA/J	ENSMUSG00210020369	pseudogene	Chr8:72168100-72168892 (-)
DBA/2J	ENSMUSG00185013379	pseudogene	Chr8:78328165-78328957 (-)
FVB/NJ	ENSMUSG00205045255	pseudogene	Chr8:71331229-71332021 (-)
JF1/MsJ	ENSUMUG00000042355	pseudogene	Chr8:80654639-80655431 (-)
LP/J	ENSMUSG00230029640	pseudogene	Chr8:81961482-81962274 (-)
NOD/ShiLtJ	ENSMUSG00190029397	pseudogene	Chr8:72219968-72220760 (-)
NZO/HlLtJ	ENSMUSG00225023276	pseudogene	Chr8:85331878-85332670 (-)
PWK/PhJ	ENSLUMG00010031844	pseudogene	Chr8:72062711-72063503 (-)
SPRET/EiJ	ENSMSPG00010025486	pseudogene	Chr8:73831238-73832030 (-)
WSB/EiJ	ENSIUOG00005016606	pseudogene	Chr8:72982571-72983363 (-)

Homology

• Gene Tree
  Gm5353
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm5353
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000087321 (Evidence)
• NCBI Gene
  634222

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087321	Ensembl Gene Model | MGI Sequence Detail	793	C57BL/6J
transcript	ENSMUST00000139800	Ensembl | MGI Sequence Detail	793	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;