Zfp419 Pseudogene Detail

Summary

• Symbol
  Zfp419
• Name
  zinc finger protein 419

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3643847
  NCBI Gene: 102636026
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:9061359-9065753 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 5.32 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  10 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643847	pseudogene	Chr7:9061359-9068439 (-)
129S1/SvImJ	ENSMUSG00200041866	pseudogene	Chr7:2427438-2430814 (-)
A/J	no annotation
AKR/J	ENSMUSG00220033218	pseudogene	Chr7:1761260-1761283 (+)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185049200	pseudogene	Chr7:5934518-5938917 (-)
FVB/NJ	ENSMUSG00205049836	pseudogene	Chr7:4178532-4178555 (-)
JF1/MsJ	ENSUMUG00000055538	pseudogene	Chr7:4362005-4366404 (-)
JF1/MsJ	ENSUMUG00000054451	pseudogene	Chr7:5249666-5254036 (-)
JF1/MsJ	ENSUMUG00000054411	pseudogene	Chr7:4526455-4530823 (-)
LP/J	ENSMUSG00230041794	pseudogene	Chr7:7427366-7431744 (-)
LP/J	ENSMUSG00230041795	pseudogene	Chr7:8855866-8860242 (-)
LP/J	ENSMUSG00230041789	pseudogene	Chr7:8117608-8121996 (-)
LP/J	ENSMUSG00230041819	pseudogene	Chr7:9131452-9135827 (-)
NOD/ShiLtJ	ENSMUSG00190042198	pseudogene	Chr6:42363717-42368067 (-)
NOD/ShiLtJ	ENSMUSG00190027944	pseudogene	Chr14:105516726-105521102 (-)
NZO/HlLtJ	ENSMUSG00225022608	pseudogene	Chr7:5270962-5275335 (-)
NZO/HlLtJ	ENSMUSG00225022584	pseudogene	Chr7:5961193-5965581 (-)
NZO/HlLtJ	ENSMUSG00225022613	pseudogene	Chr7:6699482-6703858 (-)
NZO/HlLtJ	ENSMUSG00225022623	pseudogene	Chr7:6975580-6979955 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010050523	pseudogene	Chr7:4053253-4053289 (-)
WSB/EiJ	ENSIUOG00005052994	pseudogene	Chr7:4161248-4165616 (-)

Homology

• Gene Tree
  Zfp419
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000092312 (Evidence)
• NCBI Gene
  102636026

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092312	Ensembl Gene Model | MGI Sequence Detail	4395	C57BL/6J
transcript	ENSMUST00000173446	Ensembl | MGI Sequence Detail	916	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;