Gm5989 Pseudogene Detail

Summary

• Symbol
  Gm5989
• Name
  predicted pseudogene 5989

• Feature Type
  pseudogene
• IDs
  MGI:3643846
  NCBI Gene: 546894
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:23157988-23160060 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 10.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  40

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643846	pseudogene	Chr6:23157984-23160060 (-)
129S1/SvImJ	ENSMUSG00200035208	pseudogene	Chr6:20216472-20218548 (-)
A/J	ENSMUSG00195009495	pseudogene	Chr6:20181608-20183684 (-)
AKR/J	ENSMUSG00220001098	pseudogene	Chr6:19749690-19751766 (-)
BALB/cJ	ENSMUSG00180023874	pseudogene	Chr6:20312673-20314749 (-)
C3H/HeJ	ENSMUSG00175019397	pseudogene	Chr6:20128153-20130229 (-)
C57BL/6NJ	ENSMUSG00215025989	pseudogene	Chr6:20219971-20222047 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022678	pseudogene	Chr6:19876181-19878239 (-)
CAST/EiJ	ENSTCUG00005022685	pseudogene	Chr6:19883538-19885596 (-)
CAST/EiJ	ENSTCUG00005022124	pseudogene	Chr6:19890899-19892957 (-)
CAST/EiJ	ENSTCUG00005022707	pseudogene	Chr6:19905627-19907685 (-)
CAST/EiJ	ENSTCUG00005022692	pseudogene	Chr6:19898252-19900310 (-)
CBA/J	ENSMUSG00210005018	pseudogene	Chr6:20166937-20169013 (-)
DBA/2J	ENSMUSG00185022257	pseudogene	Chr6:20263469-20265545 (-)
FVB/NJ	ENSMUSG00205036379	pseudogene	Chr6:20206163-20208239 (-)
FVB/NJ	ENSMUSG00205038803	pseudogene	Chr6:20220828-20222904 (-)
FVB/NJ	ENSMUSG00205038684	pseudogene	Chr6:20198852-20200928 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230021614	pseudogene	Chr6:49019076-49021128 (+)
LP/J	ENSMUSG00230030957	pseudogene	Chr6:21233384-21235460 (-)
LP/J	ENSMUSG00230021629	pseudogene	Chr6:49048443-49050495 (+)
NOD/ShiLtJ	ENSMUSG00190010453	pseudogene	Chr6:20012965-20015041 (-)
NZO/HlLtJ	ENSMUSG00225014859	pseudogene	Chr6:23192197-23194273 (-)
NZO/HlLtJ	ENSMUSG00225014851	pseudogene	Chr6:23168302-23170378 (-)
NZO/HlLtJ	ENSMUSG00225014854	pseudogene	Chr6:23182937-23185013 (-)
NZO/HlLtJ	ENSMUSG00225014785	pseudogene	Chr6:23175617-23177693 (-)
NZO/HlLtJ	ENSMUSG00225014867	pseudogene	Chr6:23206876-23208952 (-)
PWK/PhJ	ENSLUMG00010023786	pseudogene	Chr6:47033778-47035830 (+)
PWK/PhJ	ENSLUMG00010023753	pseudogene	Chr6:47018804-47020851 (+)
PWK/PhJ	ENSLUMG00010023768	pseudogene	Chr6:47026243-47028294 (+)
PWK/PhJ	ENSLUMG00010023687	pseudogene	Chr6:46981207-46983259 (+)
PWK/PhJ	ENSLUMG00010023700	pseudogene	Chr6:46988745-46990797 (+)
PWK/PhJ	ENSLUMG00010023721	pseudogene	Chr6:47003814-47005865 (+)
PWK/PhJ	ENSLUMG00010020211	pseudogene	Chr6:19747141-19749217 (-)
PWK/PhJ	ENSLUMG00010023808	pseudogene	Chr6:47048787-47050839 (+)
PWK/PhJ	ENSLUMG00010020640	pseudogene	Chr6:19761809-19763861 (-)
PWK/PhJ	ENSLUMG00010023738	pseudogene	Chr6:47011302-47013354 (+)
SPRET/EiJ	ENSMSPG00010023458	pseudogene	Chr6:20104306-20106364 (-)
WSB/EiJ	ENSIUOG00005036525	pseudogene	Chr6:20274789-20276865 (-)
WSB/EiJ	ENSIUOG00005036584	pseudogene	Chr6:20296762-20298838 (-)
WSB/EiJ	ENSIUOG00005036192	pseudogene	Chr6:20282117-20284193 (-)

Homology

• Gene Tree
  Gm5989
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  44
• RefSeq
  1

• Ensembl
  ENSMUSG00000106989 (Evidence)
• NCBI Gene
  546894

Representative Sequences			Length	Strain/Species
genomic	546894	NCBI Gene Model | MGI Sequence Detail	2073	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;