Gm6634 Gene Detail

Summary

• Symbol
  Gm6634
• Name
  predicted gene 6634

• Feature Type
  lncRNA gene
• IDs
  MGI:3643829
  NCBI Gene: 625901
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr3:70679712-70714624 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 32.55 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1018 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643829	lncRNA gene	Chr3:70567629-70785585 (-)
129S1/SvImJ	ENSMUSG00200001634	lncRNA gene	Chr3:67446608-67464688 (-)
A/J	ENSMUSG00195026973	lncRNA gene	Chr3:67547414-67565490 (-)
AKR/J	ENSMUSG00220025270	lncRNA gene	Chr3:67543650-67561723 (-)
BALB/cJ	ENSMUSG00180008754	lncRNA gene	Chr3:67628163-67646240 (-)
C3H/HeJ	ENSMUSG00175003886	lncRNA gene	Chr3:67458624-67476816 (-)
C57BL/6NJ	ENSMUSG00215006850	lncRNA gene	Chr3:67914280-67932420 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022298	lncRNA gene	Chr3:67072626-67090822 (-)
CBA/J	ENSMUSG00210002280	lncRNA gene	Chr3:67555863-67573933 (-)
DBA/2J	ENSMUSG00185015787	lncRNA gene	Chr3:67704435-67722502 (-)
FVB/NJ	ENSMUSG00205009670	lncRNA gene	Chr3:66612485-66630560 (-)
JF1/MsJ	ENSUMUG00000001310	lncRNA gene	Chr3:67282980-67300538 (-)
LP/J	ENSMUSG00230002367	lncRNA gene	Chr3:69733359-69751444 (-)
NOD/ShiLtJ	ENSMUSG00190003253	lncRNA gene	Chr3:68032513-68050674 (-)
NZO/HlLtJ	ENSMUSG00225004780	lncRNA gene	Chr3:72415921-72433990 (-)
PWK/PhJ	ENSLUMG00010015152	lncRNA gene	Chr3:67402231-67419741 (-)
SPRET/EiJ	ENSMSPG00010007999	lncRNA gene	Chr3:67954139-67971574 (-)
WSB/EiJ	ENSIUOG00005016512	lncRNA gene	Chr3:67902474-67920635 (-)

Homology

• Gene Tree
  Gm6634
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm6634
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  51
• RefSeq
  1

• Ensembl
  ENSMUSG00000119972 (Evidence)
• NCBI Gene
  625901

Representative Sequences			Length	Strain/Species
genomic	625901	NCBI Gene Model | MGI Sequence Detail	34913	C57BL/6J
transcript	NR_040556	RefSeq | MGI Sequence Detail	1804	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm6634:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr33561	Chr3:70714617-70714630 (-)	0 bp
Tssr33560	Chr3:70714580-70714600 (-)	34 bp