Gm6038 Pseudogene Detail

Summary

• Symbol
  Gm6038
• Name
  predicted pseudogene 6038

• Feature Type
  pseudogene
• IDs
  MGI:3643766
  NCBI Gene: 547447
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:69556654-69557601 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 36.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643766	pseudogene	ChrX:69553139-69557869 (+)
129S1/SvImJ	ENSMUSG00200043823	pseudogene	ChrX:51684141-51685088 (+)
A/J	ENSMUSG00195037126	pseudogene	ChrX:55297467-55298414 (+)
AKR/J	ENSMUSG00220048214	pseudogene	ChrX:50600267-50601214 (+)
AKR/J	ENSMUSG00220047202	pseudogene	ChrX:50513497-50514444 (-)
BALB/cJ	ENSMUSG00180050216	pseudogene	ChrX:51897125-51898072 (+)
C3H/HeJ	ENSMUSG00175035792	pseudogene	ChrX:55466074-55467021 (+)
C57BL/6NJ	ENSMUSG00215041905	pseudogene	ChrX:51950245-51951192 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012628	pseudogene	ChrX:44501769-44502650 (-)
CAST/EiJ	ENSTCUG00005042830	pseudogene	ChrX:53450613-53451560 (+)
CBA/J	ENSMUSG00210044405	pseudogene	ChrX:52137677-52138624 (+)
DBA/2J	ENSMUSG00185036707	pseudogene	ChrX:64586558-64587505 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000049684	pseudogene	ChrX:85419965-85420912 (+)
LP/J	ENSMUSG00230037643	pseudogene	ChrX:71142429-71143376 (+)
NOD/ShiLtJ	ENSMUSG00190043539	pseudogene	ChrX:51397652-51398599 (+)
NZO/HlLtJ	ENSMUSG00225049513	pseudogene	ChrX:76346664-76347611 (+)
PWK/PhJ	ENSLUMG00010047705	pseudogene	ChrX:51276315-51277262 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005049580	pseudogene	ChrX:52354664-52355611 (+)

Homology

• Gene Tree
  Gm6038
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087325 (Evidence)
• NCBI Gene
  547447

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087325	Ensembl Gene Model | MGI Sequence Detail	948	C57BL/6J
transcript	ENSMUST00000154310	Ensembl | MGI Sequence Detail	948	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;