Gm4839 Pseudogene Detail

Summary

• Symbol
  Gm4839
• Name
  predicted gene 4839

• Feature Type
  pseudogene
• IDs
  MGI:3643691
  NCBI Gene: 225457
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:45279578-45280193 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 24.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643691	pseudogene	Chr18:45279571-45280193 (-)
129S1/SvImJ	ENSMUSG00200030216	pseudogene	Chr18:42322730-42323352 (-)
A/J	ENSMUSG00195025148	pseudogene	Chr18:42466808-42467430 (-)
AKR/J	ENSMUSG00220021270	pseudogene	Chr18:42423481-42424104 (-)
BALB/cJ	ENSMUSG00180007795	pseudogene	Chr18:42956075-42956697 (-)
C3H/HeJ	ENSMUSG00175011315	pseudogene	Chr18:42474713-42475335 (-)
C57BL/6NJ	ENSMUSG00215008765	pseudogene	Chr18:42164524-42165146 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014197	pseudogene	Chr18:41945825-41946448 (-)
CBA/J	ENSMUSG00210022528	pseudogene	Chr18:42521699-42522321 (-)
DBA/2J	ENSMUSG00185028253	pseudogene	Chr18:42430426-42431048 (-)
FVB/NJ	ENSMUSG00205015787	pseudogene	Chr18:42017025-42017647 (-)
JF1/MsJ	ENSUMUG00000029092	pseudogene	Chr18:42509976-42510600 (-)
LP/J	ENSMUSG00230029644	pseudogene	Chr18:44499428-44500050 (-)
NOD/ShiLtJ	ENSMUSG00190027868	pseudogene	Chr18:42196234-42196856 (-)
NZO/HlLtJ	ENSMUSG00225027777	pseudogene	Chr18:44379995-44380617 (-)
PWK/PhJ	ENSLUMG00010021882	pseudogene	Chr18:42592438-42593060 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005009520	pseudogene	Chr18:42132253-42132875 (-)

Homology

• Gene Tree
  Gm4839
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000118034 (Evidence)
• NCBI Gene
  225457

Representative Sequences			Length	Strain/Species
genomic	225457	NCBI Gene Model | MGI Sequence Detail	616	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;