Gm8682 Pseudogene Detail

Summary

• Symbol
  Gm8682
• Name
  predicted gene 8682

• Feature Type
  pseudogene
• IDs
  MGI:3643679
  NCBI Gene: 667524
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:158819317-158819814 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 73.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643679	pseudogene	ChrX:158819317-158819996 (+)
129S1/SvImJ	ENSMUSG00200027396	pseudogene	ChrX:135542329-135542826 (+)
A/J	ENSMUSG00195038494	pseudogene	ChrX:140665672-140666169 (+)
AKR/J	ENSMUSG00220033074	pseudogene	ChrX:132521703-132522200 (+)
BALB/cJ	ENSMUSG00180041262	pseudogene	ChrX:136041021-136041517 (+)
C3H/HeJ	ENSMUSG00175026837	pseudogene	ChrX:140603404-140603901 (+)
C57BL/6NJ	ENSMUSG00215025508	pseudogene	ChrX:136435695-136436192 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013030	pseudogene	ChrX:148492548-148493045 (+)
CAST/EiJ	ENSTCUG00005034697	pseudogene	ChrX:138203936-138204432 (+)
CBA/J	ENSMUSG00210039953	pseudogene	ChrX:137925911-137926408 (+)
DBA/2J	ENSMUSG00185030788	pseudogene	ChrX:152871824-152872321 (+)
FVB/NJ	ENSMUSG00205034540	pseudogene	ChrX:136541559-136542056 (+)
JF1/MsJ	ENSUMUG00000037253	pseudogene	ChrX:173305154-173305650 (+)
LP/J	ENSMUSG00230014639	pseudogene	ChrX:159661751-159662248 (+)
NOD/ShiLtJ	ENSMUSG00190035635	pseudogene	ChrX:137032637-137033133 (+)
NZO/HlLtJ	ENSMUSG00225042208	pseudogene	ChrX:163050986-163051483 (+)
PWK/PhJ	ENSLUMG00010042662	pseudogene	ChrX:134386968-134387464 (+)
SPRET/EiJ	ENSMSPG00010020188	pseudogene	ChrX:139471817-139472314 (+)
WSB/EiJ	ENSIUOG00005025972	pseudogene	ChrX:137341666-137342163 (+)

Homology

• Gene Tree
  Gm8682
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm8682
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000082810 (Evidence)
• NCBI Gene
  667524

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082810	Ensembl Gene Model | MGI Sequence Detail	498	C57BL/6J
transcript	ENSMUST00000121310	Ensembl | MGI Sequence Detail	498	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:46359 Blair HJ, et al., Mouse mutants carrying deletions that remove the genes mutated in Coffin-Lowry syndrome and lactic acidosis. Hum Mol Genet. 1998 Mar;7(3):549-55