Gm5357 Pseudogene Detail

Summary

• Symbol
  Gm5357
• Name
  predicted gene 5357

• Feature Type
  pseudogene
• IDs
  MGI:3643650
  NCBI Gene: 384868
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:117215925-117217848 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 63.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643650	pseudogene	Chr8:117215785-117217957 (+)
129S1/SvImJ	ENSMUSG00200043636	pseudogene	Chr8:111552988-111554911 (+)
A/J	ENSMUSG00195027523	pseudogene	Chr8:111837767-111839690 (+)
AKR/J	ENSMUSG00220043316	pseudogene	Chr8:112028292-112030215 (+)
BALB/cJ	ENSMUSG00180028728	pseudogene	Chr8:111883384-111885307 (+)
C3H/HeJ	ENSMUSG00175033871	pseudogene	Chr8:111941358-111943280 (+)
C57BL/6NJ	ENSMUSG00215032533	pseudogene	Chr8:111514093-111516016 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035451	pseudogene	Chr8:111251503-111253415 (+)
CBA/J	ENSMUSG00210036995	pseudogene	Chr8:111856492-111858416 (+)
DBA/2J	ENSMUSG00185018319	pseudogene	Chr8:117955526-117957450 (+)
FVB/NJ	ENSMUSG00205024204	pseudogene	Chr8:110850348-110852270 (+)
JF1/MsJ	ENSUMUG00000020267	pseudogene	Chr8:120272361-120274284 (+)
LP/J	ENSMUSG00230031467	pseudogene	Chr8:121606770-121608693 (+)
NOD/ShiLtJ	ENSMUSG00190020875	pseudogene	Chr8:111983966-111985889 (+)
NZO/HlLtJ	ENSMUSG00225043464	pseudogene	Chr8:124967240-124969164 (+)
PWK/PhJ	ENSLUMG00010029731	pseudogene	Chr8:111711753-111713665 (+)
SPRET/EiJ	ENSMSPG00010039748	pseudogene	Chr8:113888580-113890488 (+)
WSB/EiJ	ENSIUOG00005030603	pseudogene	Chr8:112697596-112699519 (+)

Homology

• Gene Tree
  Gm5357
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110700 (Evidence)
• NCBI Gene
  384868

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110700	Ensembl Gene Model | MGI Sequence Detail	1924	C57BL/6J
transcript	ENSMUST00000212720	Ensembl | MGI Sequence Detail	1924	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;