Ska2l-ps Pseudogene Detail

Summary

• Symbol
  Ska2l-ps
• Name
  spindle and kinetochore associated complex subunit 2-like, pseudogene

• Feature Type
  pseudogene
• IDs
  MGI:3643639
  NCBI Gene: 625534
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:150425068-150425427 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 63.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643639	pseudogene	Chr1:150425039-150425464 (+)
129S1/SvImJ	ENSMUSG00200002862	pseudogene	Chr1:147887369-147887728 (+)
A/J	ENSMUSG00195014491	pseudogene	Chr1:147237628-147237987 (+)
AKR/J	ENSMUSG00220006679	pseudogene	Chr1:147006270-147006629 (+)
BALB/cJ	ENSMUSG00180033767	pseudogene	Chr1:147442553-147442912 (+)
C3H/HeJ	ENSMUSG00175003068	pseudogene	Chr1:147489410-147489769 (+)
C57BL/6NJ	ENSMUSG00215003987	pseudogene	Chr1:147384691-147385050 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009304	pseudogene	Chr1:141308690-141309049 (+)
CAST/EiJ	ENSTCUG00005006241	pseudogene	Chr1:146008568-146008927 (+)
CBA/J	ENSMUSG00210034652	pseudogene	Chr1:147390297-147390656 (+)
DBA/2J	ENSMUSG00185007219	pseudogene	Chr1:151650658-151651017 (+)
FVB/NJ	ENSMUSG00205034517	pseudogene	Chr1:146524764-146525123 (+)
JF1/MsJ	ENSUMUG00000012676	pseudogene	Chr1:150807794-150808153 (+)
LP/J	ENSMUSG00230000591	pseudogene	Chr1:151195923-151196282 (+)
NOD/ShiLtJ	ENSMUSG00190012887	pseudogene	Chr1:147228159-147228518 (+)
NZO/HlLtJ	ENSMUSG00225006151	pseudogene	Chr1:154928875-154929234 (+)
PWK/PhJ	ENSLUMG00010030920	pseudogene	Chr1:146172573-146172932 (+)
PWK/PhJ	ENSLUMG00010045023	pseudogene	Chr14:32198803-32199162 (+)
SPRET/EiJ	ENSMSPG00010005793	pseudogene	Chr1:149510623-149510982 (+)
WSB/EiJ	ENSIUOG00005025111	pseudogene	Chr1:146824071-146824430 (+)

Homology

• Gene Tree
  Ska2l-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Ska2l-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000101519 (Evidence)
• NCBI Gene
  625534

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101519	Ensembl Gene Model | MGI Sequence Detail	360	C57BL/6J
transcript	ENSMUST00000186208	Ensembl | MGI Sequence Detail	360	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;