Gm16380 Pseudogene Detail

Summary

• Symbol
  Gm16380
• Name
  predicted pseudogene 16380

• Feature Type
  pseudogene
• IDs
  MGI:3643564
  NCBI Gene: 100038996
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:53791368-53791845 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 29.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643564	pseudogene	Chr9:53791303-53791845 (+)
129S1/SvImJ	ENSMUSG00200035911	pseudogene	Chr9:50923800-50924277 (+)
A/J	ENSMUSG00195024060	pseudogene	Chr9:50628002-50628479 (+)
AKR/J	ENSMUSG00220033054	pseudogene	Chr9:50749287-50749764 (+)
BALB/cJ	ENSMUSG00180032147	pseudogene	Chr9:50741329-50741806 (+)
C3H/HeJ	ENSMUSG00175015984	pseudogene	Chr9:50753230-50753707 (+)
C57BL/6NJ	ENSMUSG00215037464	pseudogene	Chr9:50724758-50725235 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0018155	protein coding gene	Chr12:107105331-107109562 (+)
CAST/EiJ	ENSTCUG00005015840	pseudogene	Chr9:50659106-50659583 (+)
CBA/J	ENSMUSG00210043168	pseudogene	Chr9:50864033-50864510 (+)
DBA/2J	ENSMUSG00185044906	pseudogene	Chr9:50881958-50882435 (+)
FVB/NJ	ENSMUSG00205045433	pseudogene	Chr9:51158708-51159185 (+)
JF1/MsJ	ENSUMUG00000050831	pseudogene	Chr9:50902362-50902839 (+)
LP/J	ENSMUSG00230042631	pseudogene	Chr9:51135091-51135568 (+)
NOD/ShiLtJ	ENSMUSG00190045414	pseudogene	Chr9:50943631-50944108 (+)
NZO/HlLtJ	ENSMUSG00225028385	pseudogene	Chr9:51144343-51144820 (+)
PWK/PhJ	ENSLUMG00010039273	pseudogene	Chr9:50865374-50865851 (+)
SPRET/EiJ	ENSMSPG00010028260	pseudogene	Chr9:51809387-51809862 (+)
WSB/EiJ	ENSIUOG00005022836	pseudogene	Chr9:50358171-50358648 (+)

Homology

• Gene Tree
  Gm16380
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  7 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000059830 (Evidence)
• NCBI Gene
  100038996

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000059830	Ensembl Gene Model | MGI Sequence Detail	478	C57BL/6J
transcript	ENSMUST00000077997	Ensembl | MGI Sequence Detail	478	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;