Obox6-ps1 Pseudogene Detail

Summary

• Symbol
  Obox6-ps1
• Name
  oocyte specific homeobox 6, pseudogene 1
• Synonyms
  Gm5496

• Feature Type
  pseudogene
• IDs
  MGI:3643552
  NCBI Gene: 433129
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:61667568-61668609 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 31.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643552	pseudogene	Chr17:61667567-61668610 (+)
129S1/SvImJ	ENSMUSG00200016830	pseudogene	Chr17:56968579-56969620 (+)
A/J	ENSMUSG00195007303	pseudogene	Chr17:58343401-58344442 (+)
AKR/J	ENSMUSG00220013491	pseudogene	Chr17:57416204-57417245 (+)
BALB/cJ	ENSMUSG00180006316	pseudogene	Chr17:58087370-58088411 (+)
C3H/HeJ	ENSMUSG00175007648	pseudogene	Chr17:57399703-57400744 (+)
C57BL/6NJ	ENSMUSG00215009630	pseudogene	Chr17:57042226-57043267 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012112	pseudogene	Chr7:14855963-14857444 (-)
CAST/EiJ	ENSTCUG00005019743	pseudogene	Chr17:58042906-58043948 (+)
CBA/J	ENSMUSG00210028991	pseudogene	Chr17:57192133-57193174 (+)
DBA/2J	ENSMUSG00185009504	pseudogene	Chr17:60043634-60044675 (+)
FVB/NJ	ENSMUSG00205007633	pseudogene	Chr17:57680267-57681308 (+)
JF1/MsJ	ENSUMUG00000034522	pseudogene	Chr17:59737127-59738170 (+)
LP/J	ENSMUSG00230029380	pseudogene	Chr17:61015426-61016467 (+)
NOD/ShiLtJ	ENSMUSG00190010850	pseudogene	Chr17:57175932-57176973 (+)
NZO/HlLtJ	ENSMUSG00225026388	pseudogene	Chr17:63305857-63306898 (+)
PWK/PhJ	ENSLUMG00010009598	pseudogene	Chr17:56988116-56989157 (+)
SPRET/EiJ	ENSMSPG00010005946	pseudogene	Chr17:57335675-57336716 (+)
WSB/EiJ	ENSIUOG00005024236	pseudogene	Chr17:58015606-58016647 (+)

Homology

• Gene Tree
  Obox6-ps1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000093761 (Evidence)
• NCBI Gene
  433129

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093761	Ensembl Gene Model | MGI Sequence Detail	1042	C57BL/6J
transcript	ENSMUST00000176658	Ensembl | MGI Sequence Detail	1042	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;