Gm8804 Pseudogene Detail

Summary

• Symbol
  Gm8804
• Name
  predicted gene 8804

• Feature Type
  pseudogene
• IDs
  MGI:3643513
  NCBI Gene: 667774
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:105837256-105838053 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 53.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643513	pseudogene	Chr8:105837254-105838053 (+)
129S1/SvImJ	ENSMUSG00200015382	pseudogene	Chr8:100116677-100117474 (+)
A/J	ENSMUSG00195004400	pseudogene	Chr8:100439139-100439936 (+)
AKR/J	ENSMUSG00220012202	pseudogene	Chr8:100572969-100573766 (+)
BALB/cJ	ENSMUSG00180025038	pseudogene	Chr8:100444911-100445708 (+)
C3H/HeJ	ENSMUSG00175026289	pseudogene	Chr8:100501712-100502509 (+)
C57BL/6NJ	ENSMUSG00215001454	pseudogene	Chr8:100116002-100116799 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023634	pseudogene	Chr8:99879155-99879956 (+)
CBA/J	ENSMUSG00210037636	pseudogene	Chr8:100429393-100430190 (+)
DBA/2J	ENSMUSG00185005989	pseudogene	Chr8:106538159-106538956 (+)
FVB/NJ	ENSMUSG00205018817	pseudogene	Chr8:99413389-99414186 (+)
JF1/MsJ	ENSUMUG00000015769	pseudogene	Chr8:108871363-108872160 (+)
LP/J	ENSMUSG00230008219	pseudogene	Chr8:110218663-110219460 (+)
NOD/ShiLtJ	ENSMUSG00190030658	pseudogene	Chr8:100568362-100569159 (+)
NZO/HlLtJ	ENSMUSG00225022929	pseudogene	Chr8:113569189-113569986 (+)
PWK/PhJ	ENSLUMG00010004245	pseudogene	Chr8:100351168-100351969 (+)
SPRET/EiJ	ENSMSPG00010042503	pseudogene	Chr8:102431044-102431839 (+)
WSB/EiJ	ENSIUOG00005032490	pseudogene	Chr8:101241245-101242042 (+)

Homology

• Gene Tree
  Gm8804
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110502 (Evidence)
• NCBI Gene
  667774

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110502	Ensembl Gene Model | MGI Sequence Detail	798	C57BL/6J
transcript	ENSMUST00000212292	Ensembl | MGI Sequence Detail	798	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;