Has2os Gene Detail

Summary

• Symbol
  Has2os
• Name
  hyaluronan synthase 2, opposite strand
• Synonyms
  Has2as, Hasnt

• Feature Type
  lncRNA gene
• IDs
  MGI:3643465
  NCBI Gene: 594843
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:56553340-56557856 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 23.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643465	lncRNA gene	Chr15:56553340-56641795 (+)
129S1/SvImJ	ENSMUSG00200031807	lncRNA gene	Chr15:53531789-53620236 (+)
A/J	ENSMUSG00195006709	lncRNA gene	Chr15:53567036-53655497 (+)
AKR/J	ENSMUSG00220021829	lncRNA gene	Chr15:53598991-53687273 (+)
BALB/cJ	ENSMUSG00180009228	lncRNA gene	Chr15:53517760-53606202 (+)
C3H/HeJ	ENSMUSG00175005063	lncRNA gene	Chr15:53770722-53859135 (+)
C57BL/6NJ	ENSMUSG00215013109	lncRNA gene	Chr15:53511514-53599964 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013427	unclassified non-coding RNA gene	Chr15:50781312-50872053 (+)
CAST/EiJ	ENSTCUG00005007310	lncRNA gene	Chr15:53393255-53480618 (+)
CBA/J	ENSMUSG00210007212	lncRNA gene	Chr15:53597964-53686389 (+)
DBA/2J	ENSMUSG00185027268	lncRNA gene	Chr15:53575481-53663938 (+)
FVB/NJ	ENSMUSG00205006884	lncRNA gene	Chr15:53423194-53511664 (+)
JF1/MsJ	ENSUMUG00000033588	lncRNA gene	Chr15:53399712-53488401 (+)
LP/J	ENSMUSG00230008712	lncRNA gene	Chr15:56890429-56978871 (+)
NOD/ShiLtJ	ENSMUSG00190018715	lncRNA gene	Chr15:53584593-53673023 (+)
NZO/HlLtJ	ENSMUSG00225028776	lncRNA gene	Chr15:57226351-57314504 (+)
PWK/PhJ	ENSLUMG00010028460	lncRNA gene	Chr15:53658051-53746142 (+)
SPRET/EiJ	ENSMSPG00010024858	lncRNA gene	Chr15:54802905-54897832 (+)
WSB/EiJ	ENSIUOG00005006615	lncRNA gene	Chr15:53592810-53680985 (+)

Homology

• Gene Tree
  Has2os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  3
• Genomic Mutations
  3 involving Has2os
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  600
• Tissues
  1
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000086541 (Evidence)
• NCBI Gene
  594843

Representative Sequences			Length	Strain/Species
genomic	594843	NCBI Gene Model | MGI Sequence Detail	4517	C57BL/6J
transcript	NR_002874	RefSeq | MGI Sequence Detail	485	C57BL/6

Molecular
Reagents

• All nucleic 1

  Primer pair 1

References

• Summaries
  All 11

  Developmental Gene Expression 1

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:121991 Katayama K, et al., Characterization of chromosomal inversion of the mouse hairy ears (Eh) mutation associated with cleft palate. Mamm Genome. 2007 Apr;18(4):246-54