Gm6869 Pseudogene Detail

Summary

• Symbol
  Gm6869
• Name
  predicted gene 6869

• Feature Type
  pseudogene
• IDs
  MGI:3643459
  NCBI Gene: 628351
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:97810642-97811375 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 48.49 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643459	pseudogene	Chr12:97810642-97811375 (+)
129S1/SvImJ	ENSMUSG00200017924	pseudogene	Chr12:89593431-89594164 (+)
A/J	ENSMUSG00195022264	pseudogene	Chr12:92143579-92144312 (+)
AKR/J	ENSMUSG00220018198	pseudogene	Chr12:90035506-90036239 (+)
BALB/cJ	ENSMUSG00180015818	pseudogene	Chr12:91294461-91295194 (+)
C3H/HeJ	ENSMUSG00175036247	pseudogene	Chr12:93926034-93926767 (+)
C57BL/6NJ	ENSMUSG00215017657	pseudogene	Chr12:90594551-90595284 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006053	pseudogene	Chr12:90237905-90238653 (+)
CBA/J	ENSMUSG00210019115	pseudogene	Chr12:90955729-90956462 (+)
DBA/2J	ENSMUSG00185046187	pseudogene	Chr12:92735686-92736419 (+)
FVB/NJ	ENSMUSG00205000681	pseudogene	Chr12:90119437-90120170 (+)
JF1/MsJ	ENSUMUG00000025315	pseudogene	Chr12:97434613-97435346 (+)
LP/J	ENSMUSG00230004861	pseudogene	Chr12:99858641-99859374 (+)
NOD/ShiLtJ	ENSMUSG00190005447	pseudogene	Chr12:95192804-95193537 (-)
NZO/HlLtJ	ENSMUSG00225033863	pseudogene	Chr12:101567342-101568075 (+)
PWK/PhJ	ENSLUMG00010013991	pseudogene	Chr12:90927482-90928215 (+)
SPRET/EiJ	ENSMSPG00010020093	pseudogene	Chr12:93368707-93369456 (+)
WSB/EiJ	ENSIUOG00005002166	pseudogene	Chr12:89943017-89943750 (+)

Homology

• Gene Tree
  Gm6869
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6869
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112661 (Evidence)
• NCBI Gene
  628351

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112661	Ensembl Gene Model | MGI Sequence Detail	734	C57BL/6J
transcript	ENSMUST00000220334	Ensembl | MGI Sequence Detail	734	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;