Gm7930 Pseudogene Detail

Summary

• Symbol
  Gm7930
• Name
  predicted gene 7930

• Feature Type
  pseudogene
• IDs
  MGI:3643450
  NCBI Gene: 666100
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:30561309-30562914 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 17.49 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643450	pseudogene	Chr18:30561285-30562914 (-)
129S1/SvImJ	ENSMUSG00200016336	pseudogene	Chr18:27574971-27576618 (-)
A/J	ENSMUSG00195002489	pseudogene	Chr18:27734045-27735740 (-)
AKR/J	ENSMUSG00220011717	pseudogene	Chr18:27671663-27673378 (-)
BALB/cJ	ENSMUSG00180003637	pseudogene	Chr18:28144942-28146603 (-)
C3H/HeJ	ENSMUSG00175024747	pseudogene	Chr18:27675266-27676927 (-)
C57BL/6NJ	ENSMUSG00215024925	pseudogene	Chr18:27430896-27432501 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016316	pseudogene	Chr18:27334632-27336185 (-)
CBA/J	ENSMUSG00210016163	pseudogene	Chr18:27719050-27720745 (-)
DBA/2J	ENSMUSG00185023462	pseudogene	Chr18:27667392-27669087 (-)
FVB/NJ	ENSMUSG00205023092	pseudogene	Chr18:27394587-27396302 (-)
JF1/MsJ	ENSUMUG00000029407	pseudogene	Chr18:27755215-27756766 (-)
LP/J	ENSMUSG00230006084	pseudogene	Chr18:29762462-29764109 (-)
NOD/ShiLtJ	ENSMUSG00190007082	pseudogene	Chr18:27461705-27463400 (-)
NZO/HlLtJ	ENSMUSG00225025553	pseudogene	Chr18:29696214-29697819 (-)
PWK/PhJ	ENSLUMG00010003762	pseudogene	Chr18:27946479-27948046 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005002807	pseudogene	Chr18:27449717-27451334 (-)

Homology

• Gene Tree
  Gm7930
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000117419 (Evidence)
• NCBI Gene
  666100

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117419	Ensembl Gene Model | MGI Sequence Detail	1606	C57BL/6J
transcript	ENSMUST00000234371	Ensembl | MGI Sequence Detail	467	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;