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Gm5405 Pseudogene Detail
Summary
  • Symbol
    Gm5405
  • Name
    predicted gene 5405
Location &
Maps
more
  • Sequence Map
    Chr16:32410119-32410727 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 23.01 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643410
 pseudogene Chr16:32409756-32411044 (-)
129S1/SvImJ ENSMUSG00200036424
 pseudogene Chr16:29431187-29431795 (-)
A/J ENSMUSG00195030755
 pseudogene Chr16:28964760-28965368 (-)
AKR/J ENSMUSG00220034572
 pseudogene Chr16:29257630-29258238 (-)
BALB/cJ ENSMUSG00180031296
 pseudogene Chr16:29180635-29181243 (-)
C3H/HeJ ENSMUSG00175041105
 pseudogene Chr16:29326130-29326738 (-)
C57BL/6NJ ENSMUSG00215022772
 pseudogene Chr16:29215997-29216605 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012347
 pseudogene Chr8:87196830-87198581 (+)
CAST/EiJ ENSTCUG00005038138
 pseudogene Chr16:29599384-29599992 (-)
CBA/J ENSMUSG00210039623
 pseudogene Chr16:29368122-29368730 (-)
DBA/2J ENSMUSG00185019543
 pseudogene Chr16:29283611-29284219 (-)
FVB/NJ ENSMUSG00205026509
 pseudogene Chr16:29296278-29296886 (-)
JF1/MsJ ENSUMUG00000041107
 pseudogene Chr16:29487736-29488344 (-)
LP/J ENSMUSG00230033646
 pseudogene Chr16:31852345-31852953 (-)
NOD/ShiLtJ ENSMUSG00190036162
 pseudogene Chr16:29471612-29472220 (-)
NZO/HlLtJ ENSMUSG00225040605
 pseudogene Chr16:35084029-35084637 (-)
PWK/PhJ ENSLUMG00010033466
 pseudogene Chr16:29286216-29286825 (-)
SPRET/EiJ ENSMSPG00010019361
 pseudogene Chr16:29279059-29279667 (-)
WSB/EiJ ENSIUOG00005034232
 pseudogene Chr16:29452245-29452853 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083903 Ensembl Gene Model | MGI Sequence Detail 609 C57BL/6J ±  kb
transcript ENSMUST00000120478 Ensembl | MGI Sequence Detail 609 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:294006 Rutkowski TP, et al., Behavioral changes and growth deficits in a CRISPR engineered mouse model of the schizophrenia-associated 3q29 deletion. Mol Psychiatry. 2021 Mar;26(3):772-783
  • Latest
    J:327759 Pollak RM, et al., Metabolic effects of the schizophrenia-associated 3q29 deletion. Transl Psychiatry. 2022 Feb 17;12(1):66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory