Gm7439 Pseudogene Detail

Summary

• Symbol
  Gm7439
• Name
  predicted gene 7439

• Feature Type
  pseudogene
• IDs
  MGI:3643341
  NCBI Gene: 664995
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:55928624-55929458 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 30.13 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  185 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643341	pseudogene	Chr9:55928600-55929658 (+)
129S1/SvImJ	ENSMUSG00200035756	pseudogene	Chr9:53044050-53044884 (+)
A/J	ENSMUSG00195042602	pseudogene	Chr9:52742682-52743516 (+)
AKR/J	ENSMUSG00220032443	pseudogene	Chr9:52879851-52880685 (+)
BALB/cJ	ENSMUSG00180019644	pseudogene	Chr9:52867741-52868575 (+)
C3H/HeJ	ENSMUSG00175022088	pseudogene	Chr9:52869602-52870436 (+)
C57BL/6NJ	ENSMUSG00215036431	pseudogene	Chr9:52861121-52861955 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210042594	pseudogene	Chr9:52968355-52969189 (+)
DBA/2J	ENSMUSG00185043182	pseudogene	Chr9:53000023-53000857 (+)
FVB/NJ	ENSMUSG00205043393	pseudogene	Chr9:53311936-53312770 (+)
JF1/MsJ	ENSUMUG00000049668	pseudogene	Chr9:53013256-53014090 (+)
LP/J	ENSMUSG00230039199	pseudogene	Chr9:53243990-53244824 (+)
NOD/ShiLtJ	ENSMUSG00190045013	pseudogene	Chr9:53067401-53068235 (+)
NZO/HlLtJ	ENSMUSG00225028634	pseudogene	Chr9:53275054-53275888 (+)
PWK/PhJ	ENSLUMG00010039740	pseudogene	Chr9:52980388-52981222 (+)
SPRET/EiJ	ENSMSPG00010027998	pseudogene	Chr9:54014922-54015808 (+)
WSB/EiJ	ENSIUOG00005041909	pseudogene	Chr9:52477519-52478353 (+)

Homology

• Gene Tree
  Gm7439
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000110957 (Evidence)
• NCBI Gene
  664995

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110957	Ensembl Gene Model | MGI Sequence Detail	835	C57BL/6J
transcript	ENSMUST00000214053	Ensembl | MGI Sequence Detail	835	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;