Gm8181 Pseudogene Detail

Summary

• Symbol
  Gm8181
• Name
  predicted gene 8181

• Feature Type
  pseudogene
• IDs
  MGI:3643329
  NCBI Gene: 666594
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:43304224-43304889 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 23.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643329	pseudogene	Chr18:43304154-43307456 (+)
129S1/SvImJ	ENSMUSG00200044794	pseudogene	Chr18:40341548-40342213 (+)
A/J	ENSMUSG00195037484	pseudogene	Chr18:40500949-40501614 (+)
AKR/J	ENSMUSG00220017514	pseudogene	Chr18:40460568-40461233 (+)
BALB/cJ	ENSMUSG00180022723	pseudogene	Chr18:40946369-40947034 (+)
C3H/HeJ	ENSMUSG00175039177	pseudogene	Chr18:40447394-40448059 (+)
C57BL/6NJ	ENSMUSG00215032373	pseudogene	Chr18:40182850-40183515 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024813	pseudogene	Chr18:40023656-40024321 (+)
CBA/J	ENSMUSG00210021825	pseudogene	Chr18:40512188-40512853 (+)
DBA/2J	ENSMUSG00185020791	pseudogene	Chr18:40420860-40421525 (+)
FVB/NJ	ENSMUSG00205037267	pseudogene	Chr18:40064821-40065486 (+)
JF1/MsJ	ENSUMUG00000051037	pseudogene	Chr18:40558411-40559076 (+)
LP/J	ENSMUSG00230028557	pseudogene	Chr18:42532006-42532671 (+)
NOD/ShiLtJ	ENSMUSG00190022436	pseudogene	Chr18:40191543-40192208 (+)
NZO/HlLtJ	ENSMUSG00225027478	pseudogene	Chr18:42404312-42404977 (+)
PWK/PhJ	ENSLUMG00010013792	pseudogene	Chr18:40656073-40656738 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005008213	pseudogene	Chr18:40158233-40158898 (+)

Homology

• Gene Tree
  Gm8181
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000048188 (Evidence)
• NCBI Gene
  666594

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000048188	Ensembl Gene Model | MGI Sequence Detail	666	C57BL/6J
transcript	ENSMUST00000062242	Ensembl | MGI Sequence Detail	666	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;