Gm9335 Pseudogene Detail

Summary

• Symbol
  Gm9335
• Name
  predicted gene 9335

• Feature Type
  pseudogene
• IDs
  MGI:3643226
  NCBI Gene: 668754
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:107985882-107987192 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 56.28 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  222 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643226	pseudogene	Chr14:107985830-107987378 (+)
129S1/SvImJ	ENSMUSG00200018077	pseudogene	Chr14:96572625-96573935 (+)
A/J	ENSMUSG00195004397	pseudogene	Chr14:96654843-96656153 (+)
AKR/J	ENSMUSG00220001201	pseudogene	Chr14:96081330-96082640 (+)
BALB/cJ	ENSMUSG00180010346	pseudogene	Chr14:96137126-96138436 (+)
C3H/HeJ	ENSMUSG00175014462	pseudogene	Chr14:98066060-98067370 (+)
C57BL/6NJ	ENSMUSG00215006986	pseudogene	Chr14:96230398-96231708 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002805	pseudogene	Chr14:97608844-97610154 (+)
CBA/J	ENSMUSG00210013998	pseudogene	Chr14:96717187-96718497 (+)
DBA/2J	ENSMUSG00185021309	pseudogene	Chr14:101900322-101901632 (+)
FVB/NJ	ENSMUSG00205008414	pseudogene	Chr14:95843167-95844477 (+)
JF1/MsJ	ENSUMUG00000012275	pseudogene	Chr14:112892279-112893589 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190001687	pseudogene	Chr14:96528797-96530107 (+)
NZO/HlLtJ	ENSMUSG00225021398	pseudogene	Chr14:104172821-104174131 (+)
PWK/PhJ	ENSLUMG00010001324	pseudogene	Chr14:95783182-95784493 (+)
SPRET/EiJ	ENSMSPG00010010262	pseudogene	Chr14:99862212-99863497 (+)
WSB/EiJ	ENSIUOG00005006448	pseudogene	Chr14:95709246-95710556 (+)

Homology

• Gene Tree
  Gm9335
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9335
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  2

• Ensembl
  ENSMUSG00000115273 (Evidence)
• NCBI Gene
  668754

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115273	Ensembl Gene Model | MGI Sequence Detail	1311	C57BL/6J
transcript	ENSMUST00000226502	Ensembl | MGI Sequence Detail	1311	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;