Gm7778 Pseudogene Detail

Summary

• Symbol
  Gm7778
• Name
  predicted gene 7778

• Feature Type
  pseudogene
• IDs
  MGI:3643174
  NCBI Gene: 665768
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:33861405-33861772 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 20.80 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643174	pseudogene	Chr14:33861405-33861775 (+)
129S1/SvImJ	ENSMUSG00200038185	pseudogene	Chr14:25717434-25717801 (+)
A/J	ENSMUSG00195014825	pseudogene	Chr14:26762285-26762652 (+)
AKR/J	ENSMUSG00220037864	pseudogene	Chr14:25880988-25881355 (+)
BALB/cJ	ENSMUSG00180029181	pseudogene	Chr14:25850738-25851105 (+)
C3H/HeJ	ENSMUSG00175040784	pseudogene	Chr14:25917882-25918249 (+)
C57BL/6NJ	ENSMUSG00215033535	pseudogene	Chr14:26154594-26154961 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024293	pseudogene	Chr14:25994284-25994651 (+)
CBA/J	ENSMUSG00210044970	pseudogene	Chr14:26165071-26165438 (+)
DBA/2J	ENSMUSG00185043191	pseudogene	Chr14:30427821-30427936 (+)
FVB/NJ	ENSMUSG00205037294	pseudogene	Chr14:26022581-26022948 (+)
JF1/MsJ	ENSUMUG00000050871	pseudogene	Chr14:37707743-37708110 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190019676	pseudogene	Chr14:26174961-26175328 (+)
NZO/HlLtJ	ENSMUSG00225041975	pseudogene	Chr14:32049442-32049809 (+)
PWK/PhJ	ENSLUMG00010023540	pseudogene	Chr14:14290792-14290907 (+)
SPRET/EiJ	ENSMSPG00010042936	pseudogene	Chr14:27854691-27855061 (+)
WSB/EiJ	ENSIUOG00005012457	pseudogene	Chr14:26000096-26000463 (+)

Homology

• Gene Tree
  Gm7778
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115101 (Evidence)
• NCBI Gene
  665768

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115101	Ensembl Gene Model | MGI Sequence Detail	368	C57BL/6J
transcript	ENSMUST00000227054	Ensembl | MGI Sequence Detail	368	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;