Gm7948 Pseudogene Detail

Summary

• Symbol
  Gm7948
• Name
  predicted gene 7948

• Feature Type
  pseudogene
• IDs
  MGI:3643172
  NCBI Gene: 666146
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:74598321-74599164 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 35.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643172	pseudogene	Chr8:74598321-74599240 (+)
129S1/SvImJ	ENSMUSG00200033583	pseudogene	Chr8:68957788-68958630 (+)
A/J	ENSMUSG00195018517	pseudogene	Chr8:69310290-69311133 (+)
AKR/J	ENSMUSG00220025795	pseudogene	Chr8:69427896-69428739 (+)
BALB/cJ	ENSMUSG00180029515	pseudogene	Chr8:69185962-69186804 (+)
C3H/HeJ	ENSMUSG00175023014	pseudogene	Chr8:69292034-69292876 (+)
C57BL/6NJ	ENSMUSG00215037858	pseudogene	Chr8:68871119-68871962 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040714	pseudogene	Chr8:68846983-68847826 (+)
CBA/J	ENSMUSG00210035507	pseudogene	Chr8:69202352-69203194 (+)
DBA/2J	ENSMUSG00185013437	pseudogene	Chr8:75360526-75361368 (+)
FVB/NJ	ENSMUSG00205043861	pseudogene	Chr8:68467781-68468623 (+)
JF1/MsJ	ENSUMUG00000042114	pseudogene	Chr8:77656018-77656861 (+)
LP/J	ENSMUSG00230034840	pseudogene	Chr8:78984736-78985579 (+)
NOD/ShiLtJ	ENSMUSG00190033572	pseudogene	Chr8:69202601-69203444 (+)
NZO/HlLtJ	ENSMUSG00225023473	pseudogene	Chr8:82370221-82371063 (+)
PWK/PhJ	ENSLUMG00010036659	pseudogene	Chr8:69068274-69069117 (+)
SPRET/EiJ	ENSMSPG00010042950	pseudogene	Chr8:70825130-70825973 (+)
WSB/EiJ	ENSIUOG00005026664	pseudogene	Chr8:69949959-69950802 (+)

Homology

• Gene Tree
  Gm7948
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm7948
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110609 (Evidence)
• NCBI Gene
  666146

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110609	Ensembl Gene Model | MGI Sequence Detail	844	C57BL/6J
transcript	ENSMUST00000212607	Ensembl | MGI Sequence Detail	844	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;