Gm10364 Pseudogene Detail

Summary

• Symbol
  Gm10364
• Name
  predicted pseudogene 10364
• Synonyms
  EG545052

• Feature Type
  pseudogene
• IDs
  MGI:3643153
  NCBI Gene: 100151693
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:55279229-55280229 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 28.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643153	pseudogene	Chr14:55275919-55280433 (+)
129S1/SvImJ	ENSMUSG00200043452	pseudogene	Chr14:43856216-43860648 (+)
A/J	ENSMUSG00195034793	pseudogene	Chr14:44080560-44084992 (+)
AKR/J	ENSMUSG00220029755	pseudogene	Chr14:43408491-43412923 (+)
BALB/cJ	ENSMUSG00180052925	pseudogene	Chr14:43704301-43708733 (+)
C3H/HeJ	ENSMUSG00175052604	pseudogene	Chr14:45386669-45391101 (+)
C57BL/6NJ	ENSMUSG00215049121	pseudogene	Chr14:43599044-43603562 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036835	pseudogene	Chr14:46467499-46468647 (+)
CAST/EiJ	ENSTCUG00005049353	pseudogene	Chr14:45383725-45388207 (+)
CBA/J	ENSMUSG00210049592	pseudogene	Chr14:44067183-44071615 (+)
DBA/2J	ENSMUSG00185056180	pseudogene	Chr14:49126169-49130589 (+)
FVB/NJ	ENSMUSG00205043526	pseudogene	Chr14:43463751-43468171 (+)
JF1/MsJ	ENSUMUG00000054381	pseudogene	Chr14:60365345-60369841 (+)
LP/J	ENSMUSG00230053150	pseudogene	Chr14:61222106-61226538 (+)
NOD/ShiLtJ	ENSMUSG00190047556	pseudogene	Chr14:43824661-43829081 (+)
NZO/HlLtJ	ENSMUSG00225046537	pseudogene	Chr14:51520225-51524657 (+)
PWK/PhJ	ENSLUMG00010048705	pseudogene	Chr14:43289955-43294387 (+)
SPRET/EiJ	ENSMSPG00010049292	pseudogene	Chr14:46688046-46692491 (+)
WSB/EiJ	ENSIUOG00005046528	pseudogene	Chr14:43288921-43293356 (+)

Homology

• Gene Tree
  Gm10364
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  1 involving Gm10364
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000072492 (Evidence)
• NCBI Gene
  100151693

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000072492	Ensembl Gene Model | MGI Sequence Detail	1001	C57BL/6J
transcript	ENSMUST00000153034	Ensembl | MGI Sequence Detail	1001	Not Applicable
polypeptide	Q499D1	UniProt | EBI | MGI Sequence Detail	118	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• EC
  1.2.1.12
• InterPro Domains
  IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
  IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
  IPR036291 NAD(P)-binding domain superfamily

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 12

  Phenotypes 4
• Earliest
  J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42