About   Help   FAQ
Gm9946 Gene Detail
Summary
  • Symbol
    Gm9946
  • Name
    predicted gene 9946
  • Synonyms
    EG330403
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3643134
    NCBI Gene: 330403
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:117536658-117549290 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 6, 55.26 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    182 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643134
lncRNA gene Chr6:117536658-117549290 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007050
lincRNA gene Chr6:120262144-120274772 (+)
A/J MGP_AJ_G0007046
lincRNA gene Chr6:115656376-115668998 (+)
AKR/J MGP_AKRJ_G0007015
lincRNA gene Chr6:118777659-118790593 (+)
BALB/cJ MGP_BALBcJ_G0007021
lincRNA gene Chr6:115451681-115464313 (+)
C3H/HeJ MGP_C3HHeJ_G0006902
lincRNA gene Chr6:65519580-65532186 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007187
lincRNA gene Chr6:123349588-123362192 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006417
lincRNA gene Chr6:112610841-112624720 (+)
CAST/EiJ MGP_CASTEiJ_G0006877
lincRNA gene Chr6:119133631-119146216 (+)
CBA/J MGP_CBAJ_G0006946
lincRNA gene Chr6:128240272-128252908 (+)
DBA/2J MGP_DBA2J_G0006968
lincRNA gene Chr6:114576916-114589532 (+)
FVB/NJ MGP_FVBNJ_G0006992
lincRNA gene Chr6:113720177-113733101 (+)
LP/J MGP_LPJ_G0007053
lincRNA gene Chr6:120310771-120323359 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006972
lincRNA gene Chr6:132341210-132353850 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007192
lincRNA gene Chr6:118796202-118808590 (+)
PWK/PhJ MGP_PWKPhJ_G0006817
lincRNA gene Chr6:113559753-113573377 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006727
lincRNA gene Chr6:117507786-117520596 (+)
WSB/EiJ MGP_WSBEiJ_G0006935
lincRNA gene Chr6:119075945-119088580 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 330403 NCBI Gene Model | MGI Sequence Detail 12633 C57BL/6J ±  kb
transcript NR_168036 RefSeq | MGI Sequence Detail 1580 C57BL/6  
polypeptide Q8C7M1 UniProt | EBI | MGI Sequence Detail 127 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 13
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/19/2024
MGI 6.23
The Jackson Laboratory