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Igkv14-126 Pseudogene Detail
Summary
  • Symbol
    Igkv14-126
  • Name
    immunoglobulin kappa variable 14-126
Location &
Maps
more
  • Sequence Map
    Chr6:67873161-67873626 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643131
 pseudogenic gene segment Chr6:67873156-67873626 (+)
129S1/SvImJ MGP_129S1SvImJ_G0000114
 gene segment Chr6:68004209-68004679 (+)
A/J MGP_AJ_G0000106
 gene segment Chr6:65090967-65091437 (+)
AKR/J MGP_AKRJ_G0000113
 gene segment Chr6:67119881-67120351 (+)
BALB/cJ MGP_BALBcJ_G0000101
 gene segment Chr6:65454072-65454542 (+)
C3H/HeJ MGP_C3HHeJ_G0000150
 gene segment Chr6:117065167-117065637 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000153
 gene segment Chr6:69621030-69621500 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0000067
 gene segment Chr6:64801615-64801912 (+)
CAST/EiJ MGP_CASTEiJ_G0000115
 gene segment Chr6:67354147-67354617 (+)
CBA/J MGP_CBAJ_G0000107
 gene segment Chr6:72461950-72462420 (+)
DBA/2J MGP_DBA2J_G0000103
 gene segment Chr6:64762384-64762854 (+)
FVB/NJ MGP_FVBNJ_G0000101
 gene segment Chr6:64200314-64200784 (+)
LP/J MGP_LPJ_G0000119
 gene segment Chr6:67903728-67904198 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0000117
 gene segment Chr6:76179078-76179548 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0000137
 gene segment Chr6:67104256-67104726 (+)
PWK/PhJ MGP_PWKPhJ_G0000101
 gene segment Chr6:63673674-63673971 (+)
SPRET/EiJ MGP_SPRETEiJ_G0000076
 gene segment Chr6:66554659-66554956 (+)
WSB/EiJ MGP_WSBEiJ_G0000112
 gene segment Chr6:67313068-67313538 (+)



Homology
more
  • Human Ortholog
    IGKV1-27, immunoglobulin kappa variable 1-27
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IGKV1-27, immunoglobulin kappa variable 1-27
  • Synonyms
    A20, IGKV127
  • Links
    NCBI Gene ID: 28935
    UniProt: A0A075B6S5

  • Chr Location
    2p11.2; chr2:89213423-89213928 (-)  GRCh38
  • Human Ortholog
    IGKV1-33, immunoglobulin kappa variable 1-33
  • Synonyms
    IGKV133, O18
  • Links
    NCBI Gene ID: 28933

  • Chr Location
    2p11.2; chr2:89268001-89268506 (-)  GRCh38
  • Human Ortholog
    IGKV1-37, immunoglobulin kappa variable 1-37 (non-functional)
  • Synonyms
    IGKV137, O14
  • Links
    NCBI Gene ID: 28931
    UniProt: A0A075B6S9

  • Chr Location
    2p11.2; chr2:89297264-89297785 (-)  GRCh38
  • Human Ortholog
    IGKV1D-33, immunoglobulin kappa variable 1D-33
  • Synonyms
    IGKV1D33, O8
  • Links
    NCBI Gene ID: 28896
    UniProt: P01593

  • Chr Location
    2p11.2; chr2:89913982-89914545 (+)  GRCh38
  • Human Ortholog
    IGKV1D-37, immunoglobulin kappa variable 1D-37 (non-functional)
  • Synonyms
    IGKV1D37, O4
  • Links
    NCBI Gene ID: 28894
    UniProt: P0DSN7

  • Chr Location
    2p11.2; chr2:89884740-89885216 (+)  GRCh38
  • Human Ortholog
    IGKV1D-43, immunoglobulin kappa variable 1D-43
  • Synonyms
    IGKV1D43, L23, L23a
  • Links
    NCBI Gene ID: 28891
    UniProt: A0A0B4J1Z2

  • Chr Location
    2p11.2; chr2:90209873-90210529 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    109
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 628127 NCBI Gene Model | MGI Sequence Detail 466 C57BL/6J ±  kb
transcript M59918 GenBank | ENA | DDBJ | MGI Sequence Detail 387 Not Specified  
polypeptide A0A075B5K0 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6
References
more
  • Summaries
    All 10
    Gene Ontology 1
  • Earliest
    J:8490 Reininger L, et al., Novel V genes encode virtually identical variable regions of six murine monoclonal anti-bromelain-treated red blood cell autoantibodies. J Immunol. 1987 Jan 1;138(1):316-23
  • Latest
    J:337310 Trad A, et al., Clonal Progression during the T Cell-Dependent B Cell Antibody Response Depends on the Immunoglobulin DH Gene Segment Repertoire. Front Immunol. 2014;5:385
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory