Gm4962 Pseudogene Detail

Summary

• Symbol
  Gm4962
• Name
  predicted gene 4962

• Feature Type
  pseudogene
• IDs
  MGI:3643111
  NCBI Gene: 242987
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:50837124-50840033 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 26.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  331 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643111	pseudogene	Chr5:50837058-50840034 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195016028	pseudogene	Chr5:45746197-45749176 (+)
AKR/J	ENSMUSG00220000801	pseudogene	Chr5:45815970-45818940 (+)
BALB/cJ	ENSMUSG00180006760	pseudogene	Chr5:45514626-45517596 (+)
C3H/HeJ	ENSMUSG00175015582	pseudogene	Chr5:47559143-47562116 (+)
C57BL/6NJ	ENSMUSG00215001798	pseudogene	Chr5:46310931-46313910 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036881	pseudogene	Chr5:44678028-44681119 (+)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210024699	pseudogene	Chr5:46497004-46499983 (+)
DBA/2J	ENSMUSG00185001778	pseudogene	Chr5:48375329-48378305 (+)
FVB/NJ	ENSMUSG00205003027	pseudogene	Chr5:45301644-45304625 (+)
JF1/MsJ	ENSUMUG00000000797	pseudogene	Chr5:52971453-52974440 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190000884	pseudogene	Chr5:45472350-45475298 (+)
NZO/HlLtJ	ENSMUSG00225028559	pseudogene	Chr5:58186395-58189346 (+)
PWK/PhJ	ENSLUMG00010001592	pseudogene	Chr5:45627776-45630712 (+)
SPRET/EiJ	ENSMSPG00010013214	pseudogene	Chr5:47070604-47073618 (+)
WSB/EiJ	ENSIUOG00005019938	pseudogene	Chr5:48437513-48440477 (+)

Homology

• Gene Tree
  Gm4962
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm4962
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000106038 (Evidence)
• NCBI Gene
  242987

Representative Sequences			Length	Strain/Species
genomic	242987	NCBI Gene Model | MGI Sequence Detail	2910	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17