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Pabpc4l Gene Detail
Summary
  • Symbol
    Pabpc4l
  • Name
    poly(A) binding protein, cytoplasmic 4-like
  • Synonyms
    C330050A14Rik, EG241989
  • Feature Type
    protein coding gene
  • IDs
    MGI:3643087
    NCBI Gene: 241989
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:46396632-46402654 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 20.74 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    320 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643087
 protein coding gene Chr3:46395291-46402654 (-)
129S1/SvImJ ENSMUSG00200000323
 protein coding gene Chr3:43182905-43188926 (-)
A/J ENSMUSG00195000664
 protein coding gene Chr3:43152061-43158125 (-)
AKR/J ENSMUSG00220015589
 protein coding gene Chr3:43183874-43189909 (-)
BALB/cJ ENSMUSG00180000294
 protein coding gene Chr3:43238229-43244265 (-)
C3H/HeJ ENSMUSG00175002074
 protein coding gene Chr3:43108904-43114925 (-)
C57BL/6NJ ENSMUSG00215000547
 protein coding gene Chr3:43519386-43525408 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024968
 protein coding gene Chr3:40505519-40511523 (-)
CAST/EiJ ENSTCUG00005009384
 protein coding gene Chr3:42926498-42932504 (-)
CBA/J ENSMUSG00210000568
 protein coding gene Chr3:43220243-43226265 (-)
DBA/2J ENSMUSG00185000221
 protein coding gene Chr3:43400603-43406637 (-)
FVB/NJ ENSMUSG00205008924
 protein coding gene Chr3:42378659-42384693 (-)
JF1/MsJ ENSUMUG00000017256
 protein coding gene Chr3:42867889-42873917 (-)
LP/J ENSMUSG00230000153
 protein coding gene Chr3:45393028-45399049 (-)
NOD/ShiLtJ ENSMUSG00190000181
 protein coding gene Chr3:43494950-43500985 (-)
NZO/HlLtJ ENSMUSG00225000460
 protein coding gene Chr3:48014314-48020335 (-)
PWK/PhJ no annotation
SPRET/EiJ ENSMSPG00010007051
 protein coding gene Chr3:43547244-43550781 (-)
WSB/EiJ ENSIUOG00005000415
 protein coding gene Chr3:43340327-43346343 (-)



Homology
more
  • Human Ortholog
    PABPC4L, poly(A) binding protein cytoplasmic 4 like
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PABPC4L, poly(A) binding protein cytoplasmic 4 like
  • Links
    NCBI Gene ID: 132430
    UniProt: P0CB38

  • Chr Location
    4q28.3; chr4:133948459-134201901 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    599
  • Tissues
    2
  • cDNA Data
    6
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090919 Ensembl Gene Model | MGI Sequence Detail 6023 C57BL/6J ±  kb
transcript ENSMUST00000192793 Ensembl | MGI Sequence Detail 5252 Not Applicable  
polypeptide ENSMUSP00000141300 Ensembl | MGI Sequence Detail 370 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR034364 PABP, RNA recognition motif 1
    IPR045305 PABP, RNA recognition motif 2
    IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
    IPR003954 RNA recognition motif domain, eukaryotic-type
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
Other
Accession IDs
less
MGI:1925954
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 3
    Phenotypes 10
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory