Sox5os5 Gene Detail

Summary

• Symbol
  Sox5os5
• Name
  SRY (sex determining region Y)-box 5, opposite strand 5
• Synonyms
  Gm7518

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3643003
  NCBI Gene: 665149
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:144669291-144670633 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 77.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  48 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643003	antisense lncRNA gene	Chr6:144669291-144670633 (+)
129S1/SvImJ	ENSMUSG00200033892	lncRNA gene	Chr6:142218271-142219613 (+)
A/J	ENSMUSG00195008472	lncRNA gene	Chr6:141124542-141125884 (+)
AKR/J	ENSMUSG00220032803	lncRNA gene	Chr6:139357179-139358516 (+)
BALB/cJ	ENSMUSG00180018208	lncRNA gene	Chr6:141251744-141253086 (+)
C3H/HeJ	ENSMUSG00175035701	lncRNA gene	Chr6:141157208-141158545 (+)
C57BL/6NJ	ENSMUSG00215028726	lncRNA gene	Chr6:141317869-141319211 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003963	antisense lncRNA gene	Chr6:142516935-142518272 (+)
CAST/EiJ	ENSTCUG00005037893	lncRNA gene	Chr6:141948490-141949827 (+)
CBA/J	ENSMUSG00210005263	lncRNA gene	Chr6:141224457-141225798 (+)
DBA/2J	ENSMUSG00185016039	lncRNA gene	Chr6:141870536-141871873 (+)
FVB/NJ	ENSMUSG00205033196	lncRNA gene	Chr6:140195900-140197241 (+)
JF1/MsJ	ENSUMUG00000011516	lncRNA gene	Chr6:140536744-140538081 (+)
LP/J	ENSMUSG00230005751	lncRNA gene	Chr6:142977661-142979002 (+)
NOD/ShiLtJ	ENSMUSG00190006917	lncRNA gene	Chr6:141692811-141694152 (+)
NZO/HlLtJ	ENSMUSG00225013904	lncRNA gene	Chr6:145861090-145862427 (+)
PWK/PhJ	ENSLUMG00010037093	lncRNA gene	Chr6:139608642-139609986 (+)
SPRET/EiJ	ENSMSPG00010017394	lncRNA gene	Chr6:143519681-143521012 (+)
WSB/EiJ	ENSIUOG00005023792	lncRNA gene	Chr6:141893730-141895071 (+)

Homology

• Gene Tree
  Sox5os5
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000086731 (Evidence)
• NCBI Gene
  665149

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086731	Ensembl Gene Model | MGI Sequence Detail	1343	C57BL/6J
transcript	ENSMUST00000152192	Ensembl | MGI Sequence Detail	207	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;