Gm5392 Pseudogene Detail

Summary

• Symbol
  Gm5392
• Name
  predicted gene 5392

• Feature Type
  pseudogene
• IDs
  MGI:3642997
  NCBI Gene: 385404
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:106398412-106399040 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 47.50 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642997	pseudogene	ChrX:106398412-106401053 (-)
129S1/SvImJ	ENSMUSG00200039204	pseudogene	ChrX:88181952-88184520 (-)
A/J	ENSMUSG00195040873	pseudogene	ChrX:91912443-91915011 (-)
AKR/J	ENSMUSG00220040229	pseudogene	ChrX:86635832-86638355 (-)
BALB/cJ	ENSMUSG00180045110	pseudogene	ChrX:88578507-88581075 (-)
C3H/HeJ	ENSMUSG00175045501	pseudogene	ChrX:92154337-92156905 (-)
C57BL/6NJ	ENSMUSG00215047726	pseudogene	ChrX:88807803-88810371 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042105	pseudogene	ChrX:89580674-89583243 (-)
CBA/J	ENSMUSG00210044741	pseudogene	ChrX:89053185-89055753 (-)
DBA/2J	ENSMUSG00185045797	pseudogene	ChrX:101527184-101529707 (-)
FVB/NJ	ENSMUSG00205036577	pseudogene	ChrX:88119002-88121570 (-)
JF1/MsJ	ENSUMUG00000016951	pseudogene	ChrX:122105655-122108222 (-)
LP/J	ENSMUSG00230043644	pseudogene	ChrX:108179266-108181834 (-)
NOD/ShiLtJ	ENSMUSG00190042806	pseudogene	ChrX:88258556-88261124 (-)
NZO/HlLtJ	ENSMUSG00225040624	pseudogene	ChrX:113321269-113323837 (-)
PWK/PhJ	ENSLUMG00010040716	pseudogene	ChrX:87361889-87364457 (-)
SPRET/EiJ	ENSMSPG00010040460	pseudogene	ChrX:91677792-91680359 (-)
WSB/EiJ	ENSIUOG00005045534	pseudogene	ChrX:88761489-88764057 (-)

Homology

• Gene Tree
  Gm5392
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080758 (Evidence)
• NCBI Gene
  385404

Representative Sequences			Length	Strain/Species
genomic	385404	NCBI Gene Model | MGI Sequence Detail	629	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;