Gm7085 Pseudogene Detail

Summary

• Symbol
  Gm7085
• Name
  predicted gene 7085

• Feature Type
  pseudogene
• IDs
  MGI:3642962
  NCBI Gene: 632352
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:15269868-15270626 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 10.09 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  59 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642962	pseudogene	Chr16:15269759-15270636 (+)
129S1/SvImJ	ENSMUSG00200048722	pseudogene	Chr16:12269675-12270433 (+)
A/J	ENSMUSG00195035101	pseudogene	Chr16:11820834-11821592 (+)
AKR/J	ENSMUSG00220046944	pseudogene	Chr16:12132045-12132803 (+)
BALB/cJ	ENSMUSG00180039983	pseudogene	Chr16:12068124-12068882 (+)
C3H/HeJ	ENSMUSG00175051295	pseudogene	Chr16:12207115-12207873 (+)
C57BL/6NJ	ENSMUSG00215042887	pseudogene	Chr16:11928644-11929402 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046334	pseudogene	Chr16:12113186-12113944 (+)
CBA/J	ENSMUSG00210048627	pseudogene	Chr16:12224038-12224796 (+)
DBA/2J	ENSMUSG00185035122	pseudogene	Chr16:12169547-12170305 (+)
FVB/NJ	ENSMUSG00205049054	pseudogene	Chr16:12171754-12172512 (+)
JF1/MsJ	ENSUMUG00000054617	pseudogene	Chr16:12247615-12248373 (+)
LP/J	ENSMUSG00230045871	pseudogene	Chr16:14748084-14748842 (+)
NOD/ShiLtJ	ENSMUSG00190048942	pseudogene	Chr16:12309453-12310211 (+)
NZO/HlLtJ	ENSMUSG00225032217	pseudogene	Chr16:17993330-17994088 (+)
PWK/PhJ	ENSLUMG00010050663	pseudogene	Chr16:12128334-12129092 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005044313	pseudogene	Chr16:12276772-12277530 (+)

Homology

• Gene Tree
  Gm7085
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000116423 (Evidence)
• NCBI Gene
  632352

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116423	Ensembl Gene Model | MGI Sequence Detail	759	C57BL/6J
transcript	ENSMUST00000230636	Ensembl | MGI Sequence Detail	759	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;