Gm5301 Pseudogene Detail

Summary

• Symbol
  Gm5301
• Name
  predicted pseudogene 5301
• Synonyms
  Gm44942

• Feature Type
  pseudogene
• IDs
  MGI:3642953
  NCBI Gene: 384356
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:23165340-23167413 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 10.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  21

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642953	pseudogene	Chr6:23165172-23167421 (-)
129S1/SvImJ	ENSMUSG00200005937	pseudogene	Chr6:47529102-47531155 (+)
129S1/SvImJ	ENSMUSG00200005939	pseudogene	Chr6:47536445-47538498 (+)
129S1/SvImJ	ENSMUSG00200005933	pseudogene	Chr6:47521759-47523812 (+)
129S1/SvImJ	ENSMUSG00200035799	pseudogene	Chr6:20216476-20218549 (-)
A/J	ENSMUSG00195009376	pseudogene	Chr6:20188968-20191041 (-)
AKR/J	ENSMUSG00220001086	pseudogene	Chr6:19757049-19759122 (-)
BALB/cJ	ENSMUSG00180025230	pseudogene	Chr6:20320031-20322104 (-)
C3H/HeJ	ENSMUSG00175020418	pseudogene	Chr6:20128157-20130230 (-)
C57BL/6NJ	ENSMUSG00215032259	pseudogene	Chr6:20227330-20229403 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210004963	pseudogene	Chr6:20166941-20169014 (-)
DBA/2J	ENSMUSG00185022606	pseudogene	Chr6:20270825-20272898 (-)
FVB/NJ	ENSMUSG00205035231	pseudogene	Chr6:20213488-20215562 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230031158	pseudogene	Chr6:21239497-21240924 (-)
NOD/ShiLtJ	ENSMUSG00190010461	pseudogene	Chr6:20020959-20023032 (-)
NZO/HlLtJ	ENSMUSG00225014818	pseudogene	Chr6:23199524-23201597 (-)
NZO/HlLtJ	ENSMUSG00225021007	pseudogene	Chr6:51055225-51057278 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010023917	pseudogene	Chr6:20111687-20113746 (-)
SPRET/EiJ	ENSMSPG00010011210	pseudogene	Chr6:47662198-47664257 (+)
WSB/EiJ	ENSIUOG00005036315	pseudogene	Chr6:20289444-20291517 (-)
WSB/EiJ	ENSIUOG00005030169	pseudogene	Chr6:47646645-47648698 (+)

Homology

• Gene Tree
  Gm5301
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000107032 (Evidence)
• NCBI Gene
  384356

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107032	Ensembl Gene Model | MGI Sequence Detail	2074	C57BL/6J
transcript	ENSMUST00000096093	Ensembl | MGI Sequence Detail	2074	Not Applicable

Other
Accession IDs

MGI:5753518

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;