Rps25-ps1 Pseudogene Detail

Summary

• Symbol
  Rps25-ps1
• Name
  ribosomal protein S25, pseudogene 1
• Synonyms
  Gm10206

• Feature Type
  pseudogene
• IDs
  MGI:3642902
  NCBI Gene: 100042866
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:145212126-145212503 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 77.37 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642902	pseudogene	Chr6:145212085-145212577 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220034267	pseudogene	Chr6:139894324-139894701 (+)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175002482	pseudogene	Chr6:141694827-141695204 (+)
C3H/HeJ	ENSMUSG00175029602	pseudogene	Chr8:80506924-80507301 (-)
C57BL/6NJ	ENSMUSG00215031279	pseudogene	Chr6:141864909-141865286 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185040896	pseudogene	Chr8:86602645-86603022 (-)
DBA/2J	ENSMUSG00185016197	pseudogene	Chr6:142407661-142408038 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000047544	pseudogene	Chr6:64428568-64428945 (+)
JF1/MsJ	ENSUMUG00000047519	pseudogene	Chr6:64342438-64342815 (+)
JF1/MsJ	ENSUMUG00000010611	pseudogene	Chr6:141078468-141078845 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225022181	pseudogene	Chr6:68097527-68097904 (+)
NZO/HlLtJ	ENSMUSG00225022190	pseudogene	Chr6:68183641-68184018 (+)
NZO/HlLtJ	ENSMUSG00225014006	pseudogene	Chr6:146398189-146398566 (+)
PWK/PhJ	ENSLUMG00010051419	pseudogene	Chr4:127488501-127488876 (+)
PWK/PhJ	ENSLUMG00010036176	pseudogene	Chr6:140153856-140154233 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rps25-ps1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000067344 (Evidence)
• NCBI Gene
  100042866

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000067344	Ensembl Gene Model | MGI Sequence Detail	378	C57BL/6J
transcript	ENSMUST00000119876	Ensembl | MGI Sequence Detail	378	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;