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Gm9979 Gene Detail
Summary
  • Symbol
    Gm9979
  • Name
    predicted gene 9979
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3642885
    NCBI Gene: 791406
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:40857481-40861425 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 20.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642885
 lncRNA gene Chr13:40857481-40861425 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020478
 protein coding gene Chr13:39160834-39166046 (+)
A/J MGP_AJ_G0020432
 protein coding gene Chr13:37857394-37861379 (+)
AKR/J MGP_AKRJ_G0020410
 protein coding gene Chr13:38885882-38889839 (+)
BALB/cJ MGP_BALBcJ_G0020428
 protein coding gene Chr13:38044963-38049087 (+)
C3H/HeJ MGP_C3HHeJ_G0020227
 protein coding gene Chr13:38761288-38765127 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020861
 protein coding gene Chr13:40409643-40415093 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018448
 protein coding gene Chr13:36008515-36012850 (+)
CAST/EiJ MGP_CASTEiJ_G0019742
 protein coding gene Chr13:38529810-38534261 (+)
CBA/J MGP_CBAJ_G0020188
 protein coding gene Chr13:42113905-42117811 (+)
DBA/2J MGP_DBA2J_G0020310
 protein coding gene Chr13:37412336-37416209 (+)
FVB/NJ MGP_FVBNJ_G0020289
 protein coding gene Chr13:36924673-36928922 (+)
LP/J MGP_LPJ_G0020385
 protein coding gene Chr13:39396967-39400851 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020318
 protein coding gene Chr13:42108802-42113663 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020904
 protein coding gene Chr13:38524443-38528403 (+)
PWK/PhJ MGP_PWKPhJ_G0019497
 protein coding gene Chr13:37503643-37507857 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019327
 protein coding gene Chr13:37159550-37166310 (+)
WSB/EiJ MGP_WSBEiJ_G0019804
 protein coding gene Chr13:38842312-38847025 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055732 Ensembl Gene Model | MGI Sequence Detail 3945 C57BL/6J ±  kb
transcript ENSMUST00000069457 Ensembl | MGI Sequence Detail 3005 Not Applicable  
polypeptide Q8C8W8 UniProt | EBI | MGI Sequence Detail 108 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory