Gm10797 Gene Detail

Summary

• Symbol
  Gm10797
• Name
  predicted gene 10797

• Feature Type
  protein coding gene
• IDs
  MGI:3642860
  NCBI Gene: 100038508
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:67407872-67410093 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 34.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642860	protein coding gene	Chr10:67407872-67410093 (+)
129S1/SvImJ	ENSMUSG00200017726	unclassified gene	Chr10:64104397-64106618 (+)
A/J	ENSMUSG00195005792	unclassified gene	Chr10:64398669-64400890 (+)
AKR/J	ENSMUSG00220029243	unclassified gene	Chr10:64067481-64069702 (+)
BALB/cJ	ENSMUSG00180008024	unclassified gene	Chr10:64433187-64435408 (+)
C3H/HeJ	ENSMUSG00175013068	unclassified gene	Chr10:64285729-64287950 (+)
C57BL/6NJ	ENSMUSG00215004110	unclassified gene	Chr10:64042760-64044981 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0015411	protein coding gene	Chr10:61778411-61780644 (+)
CAST/EiJ	ENSTCUG00005027393	unclassified gene	Chr10:64013109-64015328 (+)
CBA/J	ENSMUSG00210009884	unclassified gene	Chr10:64147553-64149774 (+)
DBA/2J	ENSMUSG00185020324	unclassified gene	Chr10:64510390-64512611 (+)
FVB/NJ	ENSMUSG00205007380	unclassified gene	Chr10:64214425-64216649 (+)
JF1/MsJ	ENSUMUG00000021481	unclassified gene	Chr10:65710444-65712651 (+)
LP/J	ENSMUSG00230020180	unclassified gene	Chr10:66277160-66279383 (+)
NOD/ShiLtJ	ENSMUSG00190008190	unclassified gene	Chr10:64508761-64510985 (+)
NZO/HlLtJ	ENSMUSG00225045317	unclassified gene	Chr10:70565052-70567273 (+)
PWK/PhJ	ENSLUMG00010008228	unclassified gene	Chr10:64104850-64107089 (+)
SPRET/EiJ	ENSMSPG00010024049	unclassified gene	Chr10:65758792-65761026 (+)
WSB/EiJ	ENSIUOG00005035331	unclassified gene	Chr10:64041234-64043450 (+)

Homology

• Gene Tree
  Gm10797
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm10797
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000074999 (Evidence)
• NCBI Gene
  100038508

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000074999	Ensembl Gene Model | MGI Sequence Detail	2222	C57BL/6J
transcript	AK133396	GenBank | ENA | DDBJ | MGI Sequence Detail	2226	C57BL/6J
polypeptide	Q3V073	UniProt | EBI | MGI Sequence Detail	128	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm10797:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr93854	Chr10:67407890-67407906 (+)	26 bp