Gm9972 Gene Detail

Summary

• Symbol
  Gm9972
• Name
  predicted gene 9972

• Feature Type
  protein coding gene
• IDs
  MGI:3642779
  NCBI Gene: 791397
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:42926573-42928105 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 25.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642779	protein coding gene	Chr11:42926573-42928105 (+)
129S1/SvImJ	ENSMUSG00200007321	unclassified gene	Chr11:39996579-39998109 (+)
A/J	ENSMUSG00195007334	unclassified gene	Chr11:39948785-39950315 (+)
AKR/J	ENSMUSG00220003415	unclassified gene	Chr11:40145879-40147409 (+)
BALB/cJ	ENSMUSG00180001793	unclassified gene	Chr11:39940928-39942458 (+)
C3H/HeJ	ENSMUSG00175003860	unclassified gene	Chr11:39942456-39943986 (+)
C57BL/6NJ	ENSMUSG00215010757	unclassified gene	Chr11:39865809-39867341 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0016219	protein coding gene	Chr11:38277422-38279127 (+)
CAST/EiJ	ENSTCUG00005013250	unclassified gene	Chr11:39683190-39684721 (+)
CBA/J	ENSMUSG00210006871	unclassified gene	Chr11:39831730-39833258 (+)
DBA/2J	ENSMUSG00185010532	unclassified gene	Chr11:40019983-40021514 (+)
FVB/NJ	ENSMUSG00205011953	unclassified gene	Chr11:39948218-39949750 (+)
JF1/MsJ	ENSUMUG00000005412	unclassified gene	Chr11:40237850-40239380 (+)
LP/J	ENSMUSG00230034677	unclassified gene	Chr11:41160963-41162493 (+)
NOD/ShiLtJ	ENSMUSG00190007486	unclassified gene	Chr11:40054245-40055775 (+)
NZO/HlLtJ	ENSMUSG00225036404	unclassified gene	Chr11:43114654-43116187 (+)
PWK/PhJ	ENSLUMG00010007358	unclassified gene	Chr11:39832035-39833568 (+)
SPRET/EiJ	ENSMSPG00010002314	unclassified gene	Chr11:40424425-40425949 (+)
WSB/EiJ	ENSIUOG00005002150	unclassified gene	Chr11:39802257-39803789 (+)

Homology

• Gene Tree
  Gm9972
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9972
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000055456 (Evidence)
• NCBI Gene
  791397

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000055456	Ensembl Gene Model | MGI Sequence Detail	1533	C57BL/6J
transcript	AK086464	GenBank | ENA | DDBJ | MGI Sequence Detail	1534	C57BL/6J
polypeptide	Q8BUA5	UniProt | EBI | MGI Sequence Detail	102	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 4
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6