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Ighv1-63 Gene Detail
Summary
  • Symbol
    Ighv1-63
  • Name
    immunoglobulin heavy variable V1-63
  • Synonyms
    ENSMUSG00000071119
  • Feature Type
    gene segment
  • IDs
    MGI:3642755
    NCBI Gene: 780956
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr12:115459245-115459678 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 12, 62.58 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    150 from dbSNP Build 142
  • Strain Annotations
    6
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642755
gene segment Chr12:115459245-115459678 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0000088
gene segment Chr12:117176375-117176807 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000117
gene segment Chr12:121589231-121589664 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0000088
gene segment Chr12:126712987-126713443 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0000108
gene segment Chr12:118874474-118874905 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0000108
gene segment Chr12:116624310-116624613 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    IGHV1-18, immunoglobulin heavy variable 1-18
  • Vertebrate Orthologs
    15
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IGHV1-18, immunoglobulin heavy variable 1-18
  • Synonyms
    IGHV118
  • Links
    NCBI Gene ID: 28468
    UniProt: A0A0C4DH31

  • Chr Location
    14q32.33; chr14:106184899-106185394 (-)  GRCh38

  • Human Ortholog
    IGHV1-2, immunoglobulin heavy variable 1-2
  • Synonyms
    IGHV12, V35
  • Links
    NCBI Gene ID: 28474

  • Chr Location
    14q32.33; chr14:105986582-105987083 (-)  GRCh38

  • Human Ortholog
    IGHV1-24, immunoglobulin heavy variable 1-24
  • Synonyms
    IGHV124, VH
  • Links
    NCBI Gene ID: 28467
    UniProt: A0A0C4DH33

  • Chr Location
    14q32.33; chr14:106276546-106277043 (-)  GRCh38

  • Human Ortholog
    IGHV1-3, immunoglobulin heavy variable 1-3
  • Synonyms
    IGHV13, VI-3B
  • Links
    NCBI Gene ID: 28473
    UniProt: A0A0C4DH29

  • Chr Location
    14q32.33; chr14:106005095-106005574 (-)  GRCh38

  • Human Ortholog
    IGHV1-38-4, immunoglobulin heavy variable 1-38-4 (non-functional)
  • Synonyms
    IGHV1-C, IGHV1C
  • Links
    NCBI Gene ID: 28460
    UniProt: P0DTW3

  • Chr Location
    14q32.33

  • Human Ortholog
    IGHV1-46, immunoglobulin heavy variable 1-46
  • Synonyms
    IGHV146
  • Links
    NCBI Gene ID: 28465

  • Chr Location
    14q32.33; chr14:106511115-106511856 (-)  GRCh38

  • Human Ortholog
    IGHV1-58, immunoglobulin heavy variable 1-58
  • Synonyms
    IGHV158, VH
  • Links
    NCBI Gene ID: 28464
    UniProt: A0A0C4DH39

  • Chr Location
    14q32.33; chr14:106622357-106622855 (-)  GRCh38

  • Human Ortholog
    IGHV1-69, immunoglobulin heavy variable 1-69
  • Synonyms
    IGHV169, IGHV1-E, IGHV1E
  • Links
    NCBI Gene ID: 28461
    UniProt: P01742

  • Chr Location
    14q32.33; chr14:106714682-106715181 (-)  GRCh38

  • Human Ortholog
    IGHV1-69-2, immunoglobulin heavy variable 1-69-2
  • Synonyms
    IGHV1-F, IGHV1F
  • Links
    NCBI Gene ID: 28458
    UniProt: A0A0G2JMI3

  • Chr Location
    14q32.33; chr14:106737110-106737547 (-)  GRCh38

  • Human Ortholog
    IGHV1-69D, immunoglobulin heavy variable 1-69D
  • Links
    NCBI Gene ID: 102723169
    UniProt: A0A0B4J2H0

  • Chr Location
    14q32.33; chr14:106762092-106762588 (-)  GRCh38

  • Human Ortholog
    IGHV1OR15-1, immunoglobulin heavy variable 1/OR15-1 (non-functional)
  • Synonyms
    IGHV1/OR15-1, IGHV1OR151
  • Links
    NCBI Gene ID: 388077

  • Chr Location
    15q11.2

  • Human Ortholog
    IGHV1OR15-9, immunoglobulin heavy variable 1/OR15-9 (non-functional)
  • Synonyms
    IGHV1OR159, VSIG7
  • Links
    NCBI Gene ID: 390531

  • Chr Location
    15q11.1

  • Human Ortholog
    IGHV1OR21-1, immunoglobulin heavy variable 1/OR21-1 (non-functional)
  • Links
    NCBI Gene ID: 390530

  • Chr Location
    21p11.2; chr21:10649390-10649835 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 780956 NCBI Gene Model | MGI Sequence Detail 434 C57BL/6J ±  kb
polypeptide A0A075B5X2 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR050199 Immunoglobulin Heavy Variable
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 9
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory